Job Description Q6BF16 Confidence 93.47% Date Thu Jan 5 12:37:28 GMT 2012 Rank 377 Aligned Residues 160 % Identity 15% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																													.																																															.	.	.	.	.	.
Query SS confidence																													.																																															.	.	.	.	.	.
Query Sequence		R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	.	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	.	.	.	.	.	.
Query Conservation																													.																																															.	.	.	.	.	.
Alig confidence																													.																																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K
Template Known Secondary structure																				T		S							G	G	G														S			S	S								S											T	T		S								S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
									87	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110									.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	.	.	M	T	V	C	P	G	C	A	T	.	.	.	.	.	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	P	.	.	.	.	.	Q	Y	I	K	A	L	K	A	V
Query Conservation		.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V
Template Known Secondary structure																								T	T	S							S	S	T	T	T	S													G	G	G		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		L	P	S	D	I	A	V	F	A	V	G	.	.	.	.	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure			T	T	T	S							B		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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