Job Description Q6BF16 Confidence 98.94% Date Thu Jan 5 12:37:28 GMT 2012 Rank 130 Aligned Residues 175 % Identity 21% Template c2yzrB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii Resolution 2.30 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query Sequence		L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	.	.	.	.	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.																	.																							.	.	.	.
Template Conservation																																																						.
Template Sequence		V	E	Q	A	Q	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	A	G	G	V	A	R	M	S	D	P	A	L	I	E	E	I	M	D	A	V	S	I	P	V	M	.	A	K	C	R	I	G	H	T	T	E	A	L	V	L	E	A	I	G	V	D	M	I	D	E	S	E	V
Template Known Secondary structure												T		S						S	S										S																		S	S				.					T	T											T	T		S						T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	.	.	P	Q	Y	I	K	A	L	K	A	V	L	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	Q	A	D	P	F	F	H	I	Y	K	K	K	F	N	V	P	F	V	C	G	A	R	N	L	G	E	A	V	R	R	I	W	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	I	V	E	A	V	R	H	M	R	L	M	N	E	A	I	A	Q	L	Q	R	M	T	D	E	E	V	Y	G	V	A
Template Known Secondary structure		S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S			T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
																																																										148	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		K	F	Y	A	N	R	Y	A	E	L	A	K	T	V	R	E	G	M	G	L	P	A	T	V	L	E	N	E	P	I	Y	E	G	F	T	L	A	E	I	I	D	G	L	Y	E	V	L	L	E	V	K	K	L	G	R	L	P	V	V	N	F	A	A	G	G	V	A	T	P	A	D	A	A	L	M	M	Q	L	G	S
Template Known Secondary structure						G	G	G	G										T	T	S		S				T	T	S				T	T																					T	S		S	S						S				S										T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		D	G	V	F	V	G	S	G	I	F	K	S	E	N	P	L	E	R	.	.	.	.	A	R	A	I	V	E	A	T	Y
Template Known Secondary structure		S					S					T	S	S						.	.	.	.
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions