Job Description Q6BF16 Confidence 91.65% Date Thu Jan 5 12:37:28 GMT 2012 Rank 426 Aligned Residues 142 % Identity 17% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	.	.	.	.	.	G	T	V	L	K	P	E	Q	V
Query Conservation																																				.	.	.	.	.	.																											.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		G	R	V	Q	V	I	A	G	A	G	S	N	C	T	E	E	A	I	E	L	S	V	F	A	E	D	V	G	A	D	A	V	L	S	I	T	P	Y	Y	N	K	P	T	Q	E	G	L	R	K	H	F	G	K	V	A	E	S	I	N	L	P	I	V	L	Y	N	V	P	S	R	T	A	V	N	L	E	P	K	T	V
Template Known Secondary structure		T	S	S									S	S															T		S									S	S																			S	S												S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		D	A	L	A	R	M	G	C	Q	L	I	V	.	.	.	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D
Query Conservation														.	.	.
Alig confidence														.	.	.																											.	.
Template Conservation																																											.	.
Template Sequence		K	L	L	A	E	E	Y	S	N	I	S	A	V	K	E	A	N	P	N	L	S	Q	V	S	E	L	I	H	D	A	K	I	T	V	L	S	G	N	D	E	L	.	.	T	L	P	I	I	A	L	G	G	K	G	V	I	S	V	V	A	N	I	V	P	K	E	F	V	E	M	V	N	Y	A	L	E	G	D
Template Known Secondary structure									T	T									S												T							S	S	G	G	G	.	.								T							S	G	G	G	T															T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions