Job Description Q6BF16 Confidence 88.98% Date Thu Jan 5 12:37:28 GMT 2012 Rank 464 Aligned Residues 199 % Identity 14% Template c2rusB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:rubisco (ribulose-1,5-bisphosphate PDBTitle: crystal structure of the ternary complex of ribulose-1,5-2 bisphosphate carboxylase, mg(ii), and activator co2 at 2.3-3 angstroms resolution Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	W	Q	T	K	L	P	L	I	A	I	L	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A
Query Conservation															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																				.				.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.				.	.	.	.
Template Sequence		R	P	E	V	D	G	G	L	V	V	G	T	I	I	K	P	K	L	G	L	R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	.	D	F	I	.	.	.	.	K	N	D	E	P	Q	G	N	Q	P	F	A	P	L	R	D	T	I	A	L	V	A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K
Template Known Secondary structure				S	S	S										S	S	S	S																T	T		.	S			.	.	.	.				T	T		S	S		S	S	S																					T	S
Template Predicted Secondary structure																																						.				.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		61	.	.	.	.	.	.		.	.	70	.	.	.					.	.	.	.	.	.	80	.	.						.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.
Predicted Secondary structure									.							.	.	.	.										.	.	.	.	.						.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.							.	.	.	.										.	.	.	.	.						.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	G	A	G	T	V	.	L	K	P	E	Q	V	.	.	.	.	D	A	L	A	R	M	G	C	Q	.	.	.	.	.	L	I	V	T	P	.	.	.	.	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A
Query Conservation									.							.	.	.	.										.	.	.	.	.						.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.							.	.	.	.										.	.	.	.	.						.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F
Template Known Secondary structure										S	S																G	G	G	G	G	G																							T	T	S								S	T					S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170			.
Predicted Secondary structure																								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																							.			.	.
Query SS confidence																								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																							.			.	.
Query Sequence		T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	.	.	.	.	.	.	.	G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	.	.	.	.	.	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	.	G	C	.	.	A
Query Conservation																								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																							.			.	.
Alig confidence																								.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																							.			.	.
Template Conservation
Template Sequence		V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G	T	M	G	F	G	K	G	E	S	S	D	R	A	I	A	Y	M	L	T	Q	D	E	A	Q	G	P	F	Y	R	Q	S	W	G	G	M	K	A	C	T	P	I	I	S	G	G	M	N	A	L	R	M	P	G	F	F	E	N	L	G	N	A	N	V
Template Known Secondary structure											T		S									S																	S					S	S						T	T														T	T	T									S	S			S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	T	A	G	G	G	A	F	G	H	I	D	G	P	V	A	G	A	R	S	L	R	Q	A	W	Q	A	W	R	D	G	V
Template Known Secondary structure						S					T	S	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions