Return to main results Retrieve Phyre Job Id

Job DescriptionQ6BF16
Confidence85.07%DateThu Jan 5 12:37:28 GMT 2012
Rank495Aligned Residues91
% Identity14%Templatec2oo6A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 






























...
Query SS confidence 












































































. . .
Query Sequence  GITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHS. . .
Query Conservation            
      
   

           
  
         
             
    
  
       ...
Alig confidence 

























...




















.























.
...
Template Conservation   
    
      
    
  



 ...        
     



 

.          

     

   
 .  

Template Sequence  NAKPEGYLKILRELADFDLFWVEIDS. . . YSPQGLAYVRNHSPHPISSCE. TLFGIREFKPFFDANAVDVAIVDT. IWNG
Template Known Secondary structure 
S
TTTS

S


...S
T
SS

T.T

TT

S
.
Template Predicted Secondary structure 









...








.











.



Template SS confidence 















































































   221........230.........240...... ...250.........260....... ..270.........280.........290. ....
 
   92.......100.........110
Predicted Secondary structure  .....




Query SS confidence  . . . . .


















Query Sequence  . . . . . EVIRRAVGYGMTVCPGCAT
Query Conservation  .....         
      
 
Alig confidence  .....


















Template Conservation 

    
   
   
     
   
Template Sequence  VWQSMKIAAFADAHDINVAPHNFY
Template Known Secondary structure  TT



S
Template Predicted Secondary structure 






Template SS confidence 























   296...300.........310.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions