Return to main results Retrieve Phyre Job Id

Job DescriptionQ6BF16
Confidence92.63%DateThu Jan 5 12:37:28 GMT 2012
Rank402Aligned Residues153
% Identity14%Templatec2oktA_
PDB info PDB header:lyaseChain: A: PDB Molecule:o-succinylbenzoic acid synthetase; PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50.........60.. .......70......
Predicted Secondary structure 





.














....





Query SS confidence 













.














































. . . .













Query Sequence  QWQTKLPLIAILRG. ITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALI. . . . GAGTVLKPEQVDAL
Query Conservation        


  
  .         
      
   

           
  
         
....             
Alig confidence 













.

























.



















....













Template Conservation 

 

 
   



                 
    




.      
  

       
 



  

   
  
  
Template Sequence  QMFHVLPSFSVAYGATASGLSNKQLESLKATKPTRIKLKWT. PQIMHQIRVLRELDFHFQLVIDANESLDRQDFTQLQLL
Template Known Secondary structure  TT





SS



S

.TTTTSSS


TT


GGG
Template Predicted Secondary structure 




















.











Template SS confidence 















































































   109110.........120.........130.........140......... 150.........160.........170.........180.......
 
   77..80.........90.........100 ....... ..110.........120. ........130.........140....... ..150.
Predicted Secondary structure 









.

..



.












.

Query SS confidence 























.






. .













.

























.



Query Sequence  ARMGCQLIVTPNIHSEVIRRAVGY. GMTVCPG. . CATATEAFTALEAG. AQALKIFPSSAFGPQYIKALKAVLPS. DIAV
Query Conservation      
  
                .
      ..
 
  
   
   
.   
                      . 


Alig confidence 























.






..













.

























.



Template Conservation         



    
    
     



 


          
     
 
  
    


     
   
   

  
Template Sequence  AREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKV
Template Known Secondary structure  GGG



SSGGGGGGS
TTSS

STT


S



TSGGGTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   152...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  FAVG
Query Conservation   
 
Alig confidence 



Template Conservation      
Template Sequence  VIGG
Template Known Secondary structure  B
Template Predicted Secondary structure 
Template SS confidence 



   268.270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions