|   |
5 | . | . | . | . | 10 | . | . | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | K | L | P | L | I | A | I | L | R | G | . |
I | T | P | D | E | A | L | A | H | V | G | A | V | I | D | A | G | F | D | A | V | E | I | P | L | N | S | P | Q | W | E | Q | S | I | P | A | I | V | D | A | Y | G | D | K | A | L | I | . |
. |
. |
. |
G | A | G | T | V | L | K | P | E | Q | V | D | A | L | A | R | M |
Query Conservation |   |
  |   |   |
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|   |   |   |   |   |   |   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
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Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
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Template Sequence |   |
R | K | I | P | V | G | I | S | L | G | I | Q | E | D | L | P | Q | L | L | K | Q | V | Q | L | A | V | E | K | G | Y | Q | R | V | K | L | K | I | R | P | G | Y | D | V | E | P | V | A | L | I | R | Q | H | F | P | N | L | P | L | M | V | D | A | N | S | A | Y | T | L | A | D | L | P | Q | L | Q | R | L | D | H | Y |
Template Known Secondary structure |   |
S |  |  |  |
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| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |
| B | T | T | B | S |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
| T | T |
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| G | G | G |  |  |  |  |  | G | G | G | G | S |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1129 | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | |
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90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
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. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . |
Predicted Secondary structure |   |
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| . | . | . |
|  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
G | C | Q | L | I | V | T | P | N | I | . |
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H | S | E | V | I | R | R | A | V | G | Y | G | M | T | V | C | P | G | . |
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C | A | T | A | T | E | A | F | T | A | L | E | A | G | . |
A | Q | A | L | K | I | F | P | S | S | A | F | G | P | Q | Y | I | K | A | L | K | A | V | L | P | S | . |
D | I | A | V | F |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |
|   |
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| . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
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Alig confidence |   |
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| . | . | . |
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| . |
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Template Conservation |   |
  |
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|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
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|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
Template Sequence |   |
Q | L | A | M | I | E | Q | P | F | A | A | D | D | F | L | D | H | A | Q | L | Q | R | E | L | K | T | R | I | C | L | D | E | N | I | R | S | L | K | D | C | Q | V | A | L | A | L | G | S | C | R | S | I | N | L | K | I | P | R | V | G | G | I | H | E | A | L | K | I | A | A | F | C | Q | E | N | D | L | L | V | W |
Template Known Secondary structure |   |
|
| S |
|  |  |
|
| S |
| T | T |
| S |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
1209 | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . |
  |
  |   |
153 | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |
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| . |
|  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
A | V | G | G | V | . |
T | P | E | N | L | A | Q | W | I | D | A | G | C |
Query Conservation |   |
|   |
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| . |
|   |   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
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|
Template Sequence |   |
L | G | G | M | F | E | S | G | V | G | R | A | L | N | L | Q | F | A | S |
Template Known Secondary structure |   |
 |
|
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|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
1289 | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . | . |
  |