Job Description Q6BF16 Confidence 97.22% Date Thu Jan 5 12:37:28 GMT 2012 Rank 220 Aligned Residues 199 % Identity 12% Template c1rldB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:ribulose 1,5 bisphosphate carboxylase/oxygenase (large PDBTitle: solid-state phase transition in the crystal structure of ribulose 1,5-2 biphosphate carboxylase(slash)oxygenase Resolution 2.50 Å

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		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.
Predicted Secondary structure										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		K	L	P	L	I	A	I	L	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	.	L
Query Conservation										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	E	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G
Template Known Secondary structure		S	S								S	S	S	S	S	S															T	T		S						T	T		S	S	B	T	T	B																					S	S											S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		69	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure							.	.	.	.																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	E	Q	V	.	.	.	.	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	.	.	.	.	.	.	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A
Query Conservation							.	.	.	.																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	C	E	E	M	I	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H
Template Known Secondary structure		S															T		S						T	T	T	S																T								T	T						S		S	S	S																	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		125	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.		.
Predicted Secondary structure								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Query SS confidence								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Query Sequence		L	K	I	F	P	S	.	.	.	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	.	A	G	C	A	G	A	G	L	G	S	.	D
Query Conservation								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Alig confidence								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Template Conservation
Template Sequence		I	H	S	G	T	V	V	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	F	V	E	Q	D	R	S	R	G	I	Y	F	T	Q	D	W	V	S	L	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F	G	G	G
Template Known Secondary structure								S	S	S		T	T	T														S					B	T	T	T	T	B		S					T	T										S	S		S	G	G	G										S	S						S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	G	H	P	W	G	N	A	P	G	A	V	A	N	R	V	A	L	E	A	C	V	K	A	R
Template Known Secondary structure				T		T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions