Job Description Q6BF16 Confidence 85.31% Date Thu Jan 5 12:37:28 GMT 2012 Rank 494 Aligned Residues 119 % Identity 13% Template c1kkoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-methylaspartate ammonia-lyase; PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase Resolution 1.33 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																							.	.	.																						.	.	.	.	.	.	.
Query SS confidence																							.	.	.																						.	.	.	.	.	.	.
Query Sequence		G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	.	.	.	V	E	I	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	.	.	.	.	.	.	.	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I
Query Conservation																							.	.	.																						.	.	.	.	.	.	.
Alig confidence																							.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	X	D	P	V	R	C	A	E	Y	I	A	S	L	E	K	E	A	Q	G	L	P	L	Y	I	E	G	P	V	D	A	G	N	K	P	D	Q	I	R	X	L	T	A	I	T	K	E	L	T	R	L	G	S	G	V	K	I	V	A	D	E	W	C	N	T	Y	Q	D	I	V	D	F	T	D	A	G	S	C	H	X
Template Known Secondary structure		T	T												T	T	G	G	G	T	T	S											S	S																			T									T	T			S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		85	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		V	T	P	N	I	H	S	.	.	.	.	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	.	.	.	.	.	.	.	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F
Query Conservation									.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	I	K	T	P	D	L	G	G	I	H	N	I	V	D	A	V	L	Y	C	N	K	H	G	X	E	A	Y	Q	G	G	T	C	N	E	T	E	I	S	A	R	T	C	V	H	V	A	L	A	A	R	P	X	R	X	L	I	K	P	G	X	G	F
Template Known Secondary structure						G	G	G	G	S	S	T													T	T									T	T	S																		S						S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions