Job Description Q6BF16 Confidence 99.33% Date Thu Jan 5 12:37:28 GMT 2012 Rank 91 Aligned Residues 189 % Identity 13% Template c1kbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		W	Y	Q	L	Y	V	N	S	D	R	K	I	T	D	D	L	V	K	N	V	E	K	L	G	V	K	A	L	F	V	T	V	D	A	P	S	L	G	Q	R	E	K	D	M	K	L	K	F	S	N	T	K	T	N	V	E	E	S	.	.	.	.	.	.	.	Q	G	A	S	R	A	L	S	K	F	I	D	P	S	L
Template Known Secondary structure									S	S															T									S		S	S													T	T				S		S	S		.	.	.	.	.	.	.	S	G	G	G	G	G			S	S	S		T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																				.																														.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																				.																														.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	P	.	.	.	.	.	.	.	Q	Y	I	K	A	L	K	A	V	.	.	.	.	.	L	P	S	D	I	A	V	F	A	V	G
Query Conservation																				.																														.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence																				.																														.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		T	W	K	D	I	E	E	L	K	K	K	T	K	L	P	I	V	I	K	G	V	Q	R	T	E	D	V	I	K	A	A	E	I	G	V	S	G	V	V	L	S	N	H	G	G	R	Q	L	D	F	S	R	A	P	I	E	V	L	A	E	T	M	P	I	L	E	Q	R	N	L	K	D	K	L	E	V	F	V	D	G
Template Known Secondary structure												T			S									S										T	T		S							T	T	T	T	S	S	T	T																	T	T	T	G	G	G	T	S						S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		156	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure				.																										.	.
Query SS confidence				.																										.	.
Query Sequence		G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	.	.	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation				.																										.	.
Alig confidence				.																										.	.
Template Conservation
Template Sequence		G	V	R	R	G	T	D	V	L	K	A	L	C	L	G	A	K	G	V	G	L	G	R	P	F	L	Y	A	N	S	C	Y	G	R	N	G	V	E	K	A	I	E	I	L	R	D	E	I	E	M	S	M
Template Known Secondary structure		S			S											T		S
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions