Phyre 2 alignment of P0A9A6 with d2c42a3

Job Description P0A9A6
Confidence 20.04% Date Thu Jan 5 11:09:46 GMT 2012

Rank 479 Aligned Residues 58

% Identity 22% Template d2c42a3

SCOP info TK C-terminal domain-like TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain II

Resolution 1.78

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	.	.	.	.	K	P	F	N	F	E	G	K	K	R	M	A	F	A	E	Q	G	I	T	E	L	S	K	H	V	D	S	L	I	T	I	P
Query Conservation																																									.	.	.	.
Alig confidence												.	.	.	.																				.						.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																				.																.	.	.	.	.	.	.	.	.
Template Sequence	P	D	A	E	R	V	I	V	S	M	G	.	.	.	.	S	S	C	E	T	I	E	E	V	I	N	H	L	A	A	K	G	E	K	.	I	G	L	I	K	V	R	L	Y	R	P	F	V	S	E	.	.	.	.	.	.	.	.	.	A	F	F	A	A	L	P	A	S	A	K	V	I	T	V	L	D
Template Known Secondary structure	T	T		S							S	.	.	.	.	T														T	T	T			.							S			S	S					.	.	.	.	.	.	.	.	.					T	S		T	T
Template Predicted Secondary structure												.	.	.	.																				.																.	.	.	.	.	.	.	.	.
Template SS confidence
	267	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.										.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions