Job Description P0A9A6 Confidence 92.19% Date Thu Jan 5 11:09:46 GMT 2012 Rank 113 Aligned Residues 99 % Identity 23% Template c7mdhA_ PDB info PDB header:chloroplastic malate dehydrogenase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form Resolution 2.40 Å

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		12	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.																					.	.	.	.											.	.	.	.	.	.	.	.	.								.	.
Query SS confidence								.																					.	.	.	.											.	.	.	.	.	.	.	.	.								.	.
Query Sequence		V	I	K	V	I	G	.	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	.	.	.	.	E	F	F	A	V	N	T	D	A	Q	.	.	.	.	.	.	.	.	.	A	L	R	K	T	A	V	.	.	G	Q	T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E
Query Conservation								.																					.	.	.	.											.	.	.	.	.	.	.	.	.								.	.
Alig confidence								.																					.	.	.	.											.	.	.	.	.	.	.	.	.								.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	A	V	S	G	A	A	G	M	I	S	N	H	L	L	F	K	L	A	S	G	E	V	F	G	Q	D	Q	P	I	A	L	K	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	A	M	E	L	E	D	S	L	Y	P	L	L	R	E	V	S	I	G	I	D	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T	S													T	T	T	T		T	T											G	G	G													T	T	T		T	T								S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		V	G	R	N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	.	.	.	.	.	.	.	A	P	V	V	A	E	V	A	K	D	L	.	.	.	.	.	G	I	L	T	V	A	V	V	T	K	P
Query Conservation																																							.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	V	F	E	D	V	D	W	A	L	L	I	G	A	K	P	R	G	P	G	M	E	R	A	A	L	L	D	I	N	G	Q	I	F	A	D	Q	G	K	A	L	N	A	V	A	S	K	N	V	K	V	L	V	V	G	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T		S												T	T																									S		T	T							S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions