Job Description P0A9A6 Confidence 41.58% Date Thu Jan 5 11:09:46 GMT 2012 Rank 303 Aligned Residues 121 % Identity 19% Template c3uuwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile. Resolution 1.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																			.																		.
Query SS confidence																			.																		.
Query Sequence		N	D	A	V	I	K	V	I	G	V	G	G	G	G	G	N	A	.	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	.	N	T	D	A	Q	A	L	R	K	T	A	V	G	Q	T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A	D	E	D	R	D
Query Conservation																			.																		.
Alig confidence																			.								.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	I	K	M	G	M	I	G	L	G	S	I	A	Q	K	A	Y	L	P	I	L	T	K	S	.	.	E	R	F	E	F	V	G	A	F	T	P	N	K	V	K	R	E	K	I	C	S	D	Y	R	I	M	P	F	D	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S							T					T	S		.	.	S	S	S								S													T			B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	K	P	F	N	F	E	G	K	K	R	M	A	F	A	E	Q	G	I	T	E	L	S	K	H	V	D	S	L	I	T	I	P	N	D
Query Conservation
Alig confidence		.	.														.	.	.	.	.	.																				.	.												.	.	.	.
Template Conservation		.	.														.	.	.	.	.	.																				.	.												.	.	.	.
Template Sequence		.	.	E	S	L	A	K	K	C	D	C	I	F	L	H	.	.	.	.	.	.	S	S	T	E	T	H	Y	E	I	I	K	I	L	L	N	L	G	V	H	.	.	V	Y	V	D	K	P	L	A	S	T	V	.	.	.	.	S	Q	G	E	E	L	I	E	L	S	T	K	K	N	L	N	L	M	V	G	F	N	R
Template Known Secondary structure		.	.					T	T		S						.	.	.	.	.	.																T	T			.	.					S	S	S	S	S	S		.	.	.	.														T								G	G
Template Predicted Secondary structure		.	.														.	.	.	.	.	.																				.	.												.	.	.	.
Template SS confidence
				58	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		167
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		124

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions