Job Description P0A9A6 Confidence 28.59% Date Thu Jan 5 11:09:46 GMT 2012 Rank 375 Aligned Residues 202 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	E	L	T	N	D	A	V	I	K	V	I	G	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	N	T	D	.	.	.	.	.	.	.	A	Q	A	L	R	K	T	A	V	G	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.										.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		L	K	E	R	G	P	I	K	K	I	G	V	L	G	M	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	.	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	G	E	S	P	L	K	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	K	F
Template Known Secondary structure							S										S	T	T											S	T	T		.											T	T	T	T	T						T	T	T				S	S			G	G	G											T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
																58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																			.	.
Template Sequence		E	C	T	P	D	F	S	R	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D	F	.	.	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L	E	S	T	I	T	P	G	T	T	E	G	M	A	K	Q	I	L	E	E	E	S	G	L
Template Known Secondary structure					S		G	G	G	G	G	G		S												S	S			S	S				.	.																T	T							S				T	T	T	T	T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		124	.	.	.		.	.	130	.	.	.	.		.	.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure						.								.									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence						.								.									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		G	I	L	T	.	V	A	V	V	T	K	P	.	F	N	F	E	G	K	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	F	A	E	Q	G	I	T	E	L	S	K	H	V	.	.	D	S	L	I	T	I	P	N	D	K	L	L	K	V	L	G	R	G	I	S	L	L	D	A	F	G	A	A	N
Query Conservation						.								.									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence						.								.									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																		.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		K	A	G	E	D	F	A	L	A	H	A	P	E	R	V	M	V	G	R	L	L	K	N	I	R	E	H	D	R	I	V	G	G	I	D	E	A	S	T	K	R	A	V	E	L	Y	S	P	V	L	T	V	G	Q	V	I	P	M	S	A	T	A	A	E	V	T	K	T	.	.	.	A	E	N	T	F	R	D	L	Q
Template Known Secondary structure			B	T	T	T	B											T	T	S								S							S	S												G	G	G		S	S																	.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	K	G	A	V	Q	G	I	A	E	L	I	T	R	P	G	L	M	N	V	D	F	A	D	V	R	T	V	M
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		I	A	A	I	N	Q	L	A	L	Y	C	E	A	M	.	.	.	.	.	.	G	I	N	V	Y	D	V	R	T	G	V
Template Known Secondary structure															T	.	.	.	.	.	.	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions