Job Description P0A9A6 Confidence 88.13% Date Thu Jan 5 11:09:46 GMT 2012 Rank 131 Aligned Residues 105 % Identity 20% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.																																			.	.	.	.	.	.	.	.
Query SS confidence															.																																			.	.	.	.	.	.	.	.
Query Sequence		M	E	L	T	N	D	A	V	I	K	V	I	G	.	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	N	T	D	A	Q	A	L	R	K	.	.	.	.	.	.	.	.	T	A	V	G	Q	T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E
Query Conservation															.																																			.	.	.	.	.	.	.	.
Alig confidence															.																				.															.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	Y	L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	.	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S		S	S						S	T	T	S													T	T			S	.							S																		T	T							S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		V	G	R	N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	.	.	.	.	.	G	I	L	T	V	A	V	V	T	K	P
Query Conservation																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	L	T	D	A	K	Y	I	V	S	S	G	G	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T																																		T	T								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions