Job Description P0A9A6 Confidence 87.63% Date Thu Jan 5 11:09:46 GMT 2012 Rank 132 Aligned Residues 193 % Identity 15% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																																				.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	K	V	I	G	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	N	T	D	A	Q	A	L	R	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	G	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	.	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E	A	D	L
Template Known Secondary structure									S	T	T													.	T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S										S
Template Predicted Secondary structure																								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	K	P	.	F
Query Conservation																																																																																.
Alig confidence																																																															.	.	.	.														.
Template Conservation																																																															.	.	.	.
Template Sequence		I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	.	.	.	.	E	A	Q	K	L	K	F	Q	V	L	S	N	P	E	F
Template Known Secondary structure										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											.	.	.	.	T	T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		136	.	.	.	140	.	.	.	.																			.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		N	F	E	G	K	K	R	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	Q	G	I	T	E	L	S	K	H	V	.	.	D	S	L	I	T	I	P	N	D	K	L	L	K	V	L	G	R	G	I	S	L	L	D	A	F	G	A	A	N	D	V	L	K	G	A	V	Q	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																		.	.	.
Template Conservation																																																													.	.	.
Template Sequence		L	A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	.	.	.	V	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I	S	A
Template Known Secondary structure				T	T								S		S								S	S																T	T	S		G	G	G															.	.	.
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	L	I	T	R	P	G	L	M	N	V	D	F	A	D	V	R	T	V	M	S
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		V	C	E	A	T	.	.	.	.	.	.	G	A	E	I	S	E	V	A	H	A	V	G
Template Known Secondary structure							.	.	.	.	.	.	T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions