Job Description P0A9A6 Confidence 42.52% Date Thu Jan 5 11:09:46 GMT 2012 Rank 301 Aligned Residues 113 % Identity 20% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		8	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure													.																								.																	.	.	.
Query SS confidence													.																								.																	.	.	.
Query Sequence		T	N	D	A	V	I	K	V	I	G	V	.	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	.	V	N	T	D	A	Q	A	L	R	K	T	A	V	G	Q	T	.	.	.	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A	D
Query Conservation													.																								.																	.	.	.
Alig confidence													.																	.	.	.					.			.	.	.	.	.	.	.	.	.	.	.				.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.								.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	.	.	.	K	M	V	G	G	V	T	.	.	.	.	.	.	.	.	.	.	.	P	G	K	G	G	T	T	H	L	G	L	P	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T							T	T	T	S														T		.	.	.								.	.	.	.	.	.	.	.	.	.	.	T	T		T	T				T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.								.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	K	P	F	N	F	E	G	K	K	R	M	A	F	A	E	Q	G	I	T	E	L	S	K	H	V	D	S	L	I	T
Query Conservation
Alig confidence		.									.									.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation		.									.									.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		.	T	V	R	E	A	V	A	A	.	T	G	A	T	A	S	V	I	.	.	.	.	.	.	Y	V	P	A	P	F	C	K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	.	.	.	.	.	.	.	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I
Template Known Secondary structure		.	S								.									.	.	.	.	.	.				G	G	G											T	T																.	.	.	.	.	.	.												T
Template Predicted Secondary structure		.									.									.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
			55	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		163	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	N
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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