Job Description P0A9A6 Confidence 58.00% Date Thu Jan 5 11:09:46 GMT 2012 Rank 235 Aligned Residues 75 % Identity 24% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		L	T	N	D	A	V	I	K	V	I	G	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	N	T	D	A	Q	A	L	R	K	T	A	V	G	.	.	Q	T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A	D	E	D
Query Conservation																																																			.	.
Alig confidence																															.	.	.																		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	K	S	K	Y	I	V	I	F	G	C	G	R	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	.	.	.	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Template Known Secondary structure		.												S													T	T			.	.	.						S		G	G	G	G	G	G	S		T	T			S					S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																															.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																				.
		85	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		R	D	A	L	R	A	A	.	L	E	G	A	D	M	V	F	I	A	A	G
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N
Template Known Secondary structure							T	T	T	G	G	G		S						S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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