 |
Job Description | P0A9A6 | Confidence | 84.33% | Date | Thu Jan 5 11:09:46 GMT 2012 |
Rank | 149 | Aligned Residues | 87 |
% Identity | 11% | Template | c2ep9A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; |
PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form)
|
Resolution | 1.85 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | K | V | I | G | V | G | G | G | G | G | N | A | V | E | H | M | V | R | E | R | I | E | G | V | E | F | F | A | V | N | T | D | A | Q | A | L | R | K | T | A | V | G | Q | T | I | Q | I | G | S | G | I | T | K | G | L | G | A | G | A | N | P | E | V | G | R | N | A | A | D | E | D | R | D | A | L | R | A | A |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   | . | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | V | L | I | V | G | S | G | L | V | G | R | S | W | A | M | L | F | A | S | G | G | F | R | . |
. |
. |
V | K | L | Y | D | I | E | P | R | Q | I | T | G | A | L | E | N | I | R | K | E | M | K | S | L | Q | Q | S | G | S | L | K | G | S | L | S | A | E | E | Q | L | S | L | I | S | S | C | T | N | L | A | E | A |
Template Known Secondary structure |   |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S | S |
|  |  |  |  |  |  | T |  |  |  |
| S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
92 | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | G | A | D | M | V | F | I | A |
Query Conservation |   |
|   |   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|
|
|
Template Sequence |   |
V | E | G | V | V | H | I | Q | E | C |
Template Known Secondary structure |   |
T | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|