Job Description P0A9A6 Confidence 95.65% Date Thu Jan 5 11:09:46 GMT 2012 Rank 63 Aligned Residues 101 % Identity 26% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure											.																													.	.	.	.	.						.	.
Query SS confidence											.																													.	.	.	.	.						.	.
Query Sequence		D	A	V	I	K	V	I	G	V	.	G	G	G	G	G	N	A	V	E	H	M	V	R	E	R	I	E	G	V	E	F	F	A	V	N	T	D	A	.	.	.	.	.	Q	A	L	R	K	.	.	T	A	V	G	Q	T	I	Q	I	G	S	G	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	N	A	A
Query Conservation											.																													.	.	.	.	.						.	.
Alig confidence											.																			.										.	.	.	.	.						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	.	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T	S	T	T												T	T			.							S	S	S									T	T	S	S	S	S								S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	.	.	.	.	.	.	.	.	.	.	.	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	K	P
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	Q	L	P	D	C	L	K	G	C	D	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P
Template Known Secondary structure		.	.	.	.	G	G						T	T		S							S					T	T			G	G	G	G																				T	T	S						S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions