Job Description P0A9A6 Confidence 99.59% Date Thu Jan 5 11:09:46 GMT 2012 Rank 22 Aligned Residues 201 % Identity 19% Template c2btoA_ PDB info PDB header:cytoskeletal protein Chain: A: PDB Molecule:tubulin btuba; PDBTitle: structure of btuba from prosthecobacter dejongeii Resolution 2.5 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																															.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query Sequence		I	K	V	I	G	V	G	G	G	G	G	N	A	V	E	H	M	V	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	E	G	.	.	.	.	V	E	F	F	A	V	N	T	D	A	Q	A	L	R	K	T	A	V	G	Q	T	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation
Template Sequence		T	I	V	V	S	I	G	Q	A	G	N	Q	I	A	A	S	F	W	K	T	V	C	L	E	H	G	I	D	P	L	T	G	Q	T	A	P	G	V	A	P	R	G	N	W	S	S	F	F	S	K	L	G	E	S	G	S	Y	V	P	R	A	I	M	V	D	L	E	P	S	V	I	D	N	V	K	A	T	S	G	S
Template Known Secondary structure																											T			T	T	T				S	S	S				S	S	S	G	G	G	T					S														S	S	S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		59	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.
Predicted Secondary structure							.	.																.	.	.	.	.																					.	.	.																										.	.
Query SS confidence							.	.																.	.	.	.	.																					.	.	.																										.	.
Query Sequence		Q	I	G	S	G	.	.	I	T	K	G	L	G	A	G	A	N	P	E	V	G	R	.	.	.	.	.	N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	.	.	.	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	.	.	G	I	L
Query Conservation							.	.																.	.	.	.	.																					.	.	.																										.	.
Alig confidence							.	.																.	.	.	.	.																					.	.	.																										.	.
Template Conservation
Template Sequence		L	F	N	P	A	N	L	I	S	R	T	E	G	A	G	G	N	F	A	V	G	Y	L	G	A	G	R	E	V	L	P	E	V	M	S	R	L	D	Y	E	I	D	K	C	D	N	V	G	G	I	I	V	L	H	A	I	G	G	G	T	G	S	G	F	G	A	L	L	I	E	S	L	K	E	K	Y	G	E	I	P
Template Known Secondary structure			S		G	G	G					S	S			T	T							T	S																					S	S										S	S	S	S																	T		S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																	.	.																																								.
Query SS confidence																	.	.																																								.
Query Sequence		T	V	A	V	V	T	K	P	F	N	F	E	G	K	K	.	.	R	M	A	F	A	E	Q	G	I	T	E	L	S	K	H	V	D	S	L	I	T	I	P	N	D	K	L	L	K	V	L	G	R	G	I	S	L	L	D	.	A	F	G	A	A	N	D	V	L	K	G	A	V	Q	G	I	A	E	L	I	T	R	P
Query Conservation																	.	.																																								.
Alig confidence																	.	.																																								.
Template Conservation
Template Sequence		V	L	S	C	A	V	L	P	S	P	Q	V	S	S	V	V	T	E	P	Y	N	T	V	F	A	L	N	T	L	R	R	S	A	D	A	C	L	I	F	D	N	E	A	L	F	D	L	A	H	R	K	W	N	I	E	S	P	T	V	D	D	L	N	L	L	I	T	E	A	L	A	G	I	T	A	S	M	R	F	E
Template Known Secondary structure													S	S				S															T		S																	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	M	N	V	D	F	A	D	V	R	T	V	M
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		I	.	.	.	.	S	L	R	E	L	L	T	N	L
Template Known Secondary structure			.	.	.	.
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		254					.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions