Job Description P0A9A6 Confidence 42.97% Date Thu Jan 5 11:09:46 GMT 2012 Rank 298 Aligned Residues 81 % Identity 19% Template c1rcuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein vt76; PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		N	A	A	D	E	D	R	D	A	L	R	A	A	L	E	G	A	D	M	V	F	I	A	A	G	M	G	G	G	T	G	T	G	A	A	P	V	V	A	E	V	A	K	D	L	G	I	L	T	V	A	V	V	T	.	.	.	.	.	K	P	F	N	F	E	G	K	K	R	M	A	F	A	E	Q	G	I	T	E	L
Query Conservation																																																								.	.	.	.	.
Alig confidence																											.	.	.	.	.																									.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		S	E	L	R	D	I	C	L	E	L	G	R	T	L	A	K	K	G	Y	L	V	F	N	G	G	.	.	.	.	.	R	D	G	V	X	E	L	V	S	Q	G	V	R	E	A	G	G	T	V	V	G	I	L	P	D	E	E	A	G	N	P	Y	L	S	V	A	V	K	T	G	L	D	F	Q	X	R	S	F	V	L
Template Known Secondary structure		G	G	G														T	T								.	.	.	.	.	S	S	T												T	T								S	T	T					T	T		S						S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		154	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	H	V	D	S	L	I	T	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	N	A	D	V	V	V	S	I	G
Template Known Secondary structure			T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions