Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A6
Confidence96.48%DateThu Jan 5 11:09:46 GMT 2012
Rank43Aligned Residues97
% Identity24%Templatec1ojuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:malate dehydrogenase; PDBTitle: 2.8 a resolution structure of malate dehydrogenase from2 archaeoglobus fulgidus in complex with etheno-nad.
Resolution2.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50. ........60.........70.........80
Predicted Secondary structure 











...........

















Query SS confidence 







































. . . . . . . . . . .




























Query Sequence  VIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRK. . . . . . . . . . . TAVGQTIQIGSGITKGLGAGANPEVGRNA
Query Conservation   







 
 
 
  
       
  





 
 
  ...........  
  

 

   
 
 


  

 
  
Alig confidence 
























.













...........











.................
Template Conservation 

 




 

   
  
       .

 
 

      
 
 

            
    
.................
Template Sequence  KLGFVGAGRVGSTSAFTCLLNLDVD. EIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD. . . . . . . . . . . . . . . . .
Template Known Secondary structure 

SS

S.
SSTTT


S
.................
Template Predicted Secondary structure 








.










.................
Template SS confidence 















































































   23......30.........40....... ..50.........60.........70.........80....
 
   81........90.........100.........110 .........120... ......130....
Predicted Secondary structure 











.......
....




Query SS confidence 





























. . . . . . .












. . . .










Query Sequence  ADEDRDALRAALEGADMVFIAAGMGGGTGT. . . . . . . GAAPVVAEVAKDL. . . . GILTVAVVTKP
Query Conservation 
 
    
   
   
 


 








.......






  


 ....
 
 




 
Alig confidence  ........





















.......












....










Template Conservation  ........   
  








        
  
   
  
   
   
    
 
 






Template Sequence  . . . . . . . . YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP
Template Known Secondary structure  ........GGGGTT
S






SS

TTSTT

SSS
Template Predicted Secondary structure  ........



















Template SS confidence 
































































   85....90.........100.........110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions