Job Description P0C018 Confidence 99.83% Date Thu Jan 5 11:29:38 GMT 2012 Rank 8 Aligned Residues 114 % Identity 23% Template c2zkrn_ PDB info PDB header:ribosomal protein/rna Chain: N: PDB Molecule:rna expansion segment es27; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20								.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																					.	.
Query SS confidence																				.	.	.	.	.	.	.																					.	.
Query Sequence		K	K	S	A	R	I	R	R	A	T	R	A	R	R	K	L	Q	E	.	.	.	.	.	.	.	L	G	A	T	R	L	V	V	H	R	T	P	R	H	I	Y	A	Q	V	I	.	.	A	P	N	G	S	E	V	L	V	A	A	S	T	V	E	K	A	I	A	E	Q	L	K	Y	T	G	N	K	D	A	A	A	A
Query Conservation																				.	.	.	.	.	.	.																					.	.
Alig confidence																				.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		R	R	R	R	E	G	K	T	D	Y	Y	A	R	K	R	L	V	I	Q	D	K	N	K	Y	N	T	P	K	Y	R	M	I	V	R	V	T	N	R	D	I	I	C	Q	I	A	Y	A	R	I	E	G	D	M	I	V	C	A	R	Y	A	H	E	L	P	K	Y	G	V	K	V	G	L	T	N	Y	A	A	A	Y	C
Template Known Secondary structure						T	T		S													S	T	T		S			S									T	T											S	S	S									G	G	G	G	G	G	T				S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.																												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		V	G	K	A	V	A	E	R	A	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	D	V	S	F	D	R	S	G	F	Q	Y	H	.	.	G	R	V	Q	A	L	A	D	A	A	R	E	A	G	L	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		T	G	L	L	L	A	R	R	L	L	N	R	F	G	M	D	K	I	Y	E	G	Q	V	E	V	T	G	D	E	Y	N	V	E	S	I	D	G	Q	P	G	A	F	T	C	Y	L	D	A	G	L	A	R	T	T	T	G	N	K	V	F	G	A	L	K	G	A	V	D	G	G	L	S
Template Known Secondary structure															S						S	S			S	S	S	S						S	S	S		S	S	S				B						T	T	S				T	T													T	T		B
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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