Job Description P0C018 Confidence 96.51% Date Thu Jan 5 11:29:38 GMT 2012 Rank 16 Aligned Residues 89 % Identity 16% Template c2zkqk_ PDB info PDB header:ribosomal protein/rna Chain: K: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.						.
Predicted Secondary structure																																																																						.						.	.	.	.	.
Query SS confidence																																																																						.						.	.	.	.	.
Query Sequence		L	V	V	H	R	T	P	R	H	I	Y	A	Q	V	I	A	P	N	G	S	E	V	L	V	A	A	S	T	V	E	K	A	I	A	E	Q	L	K	Y	T	G	N	K	D	A	A	A	A	V	G	K	A	V	A	E	R	A	L	E	K	G	I	K	D	V	S	F	D	.	R	S	G	F	Q	.	.	.	.	.	Y
Query Conservation																																																																						.						.	.	.	.	.
Alig confidence																		.																			.																																	.						.	.	.	.	.
Template Conservation																		.																			.
Template Sequence		C	H	I	F	A	S	F	N	D	T	F	V	H	V	T	D	.	L	S	G	K	E	T	I	C	R	V	T	G	G	M	K	V	K	A	.	D	R	D	E	S	S	P	Y	A	A	M	L	A	A	Q	D	V	A	Q	R	C	K	E	L	G	I	T	A	L	H	I	K	L	R	A	T	G	G	N	R	T	K	T	P
Template Known Secondary structure								S	S									.	T	T									S	T	T	S	S			T	.	T	T	T	T	T	S															T	T	T	T				B							S	S			B	T	T	B
Template Predicted Secondary structure																		.																			.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	R	V	Q	A	L	A	D	A	A	R	E	A	G	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	G	A	Q	S	A	L	R	A	L	A	R	S	G	M	K
Template Known Secondary structure			T	T												T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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