Job Description P0C018 Confidence 99.64% Date Thu Jan 5 11:29:38 GMT 2012 Rank 12 Aligned Residues 114 % Identity 28% Template c1s1iE_ PDB info PDB header:ribosome Chain: E: PDB Molecule:60s ribosomal protein l5; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20								.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																					.	.
Query SS confidence																				.	.	.	.	.	.	.																					.	.
Query Sequence		K	K	S	A	R	I	R	R	A	T	R	A	R	R	K	L	Q	E	.	.	.	.	.	.	.	L	G	A	T	R	L	V	V	H	R	T	P	R	H	I	Y	A	Q	V	I	.	.	A	P	N	G	S	E	V	L	V	A	A	S	T	V	E	K	A	I	A	E	Q	L	K	Y	T	G	N	K	D	A	A	A	A
Query Conservation																				.	.	.	.	.	.	.																					.	.
Alig confidence																				.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		R	R	R	R	E	G	K	T	D	Y	Y	Q	R	K	R	L	V	T	Q	H	K	A	K	Y	N	T	P	K	Y	R	L	V	V	R	F	T	N	K	D	I	I	C	Q	I	I	S	S	T	I	T	G	D	V	V	L	A	A	A	Y	S	H	E	L	P	R	Y	G	I	T	H	G	L	T	N	W	A	A	A	Y	A
Template Known Secondary structure		S	S		S	S		S	S		S	S	S	S	S					B			S	S	S	S		S	S									T	T											S	S					S					B	T	S			S	S	S			S		S	S	S	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		74	.	.	.	.	.	80	.	.	.	.	.																												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		V	G	K	A	V	A	E	R	A	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	D	V	S	F	D	R	S	G	F	Q	Y	H	.	.	G	R	V	Q	A	L	A	D	A	A	R	E	A	G	L	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		T	G	L	L	I	A	R	R	T	L	Q	R	L	G	L	D	E	T	Y	K	G	V	E	E	V	E	G	E	Y	E	L	T	E	A	V	E	D	G	P	R	P	F	K	V	F	L	D	I	G	L	Q	R	T	T	T	G	A	R	V	F	G	A	L	K	G	A	S	D	G	G	L	Y
Template Known Secondary structure		T	T	T	S	S	T	T	T	T	T	T	T	S			S	S			S	S	S		S	S	S	S					S	S	S		T	T		S	T	T							B		S					S	S									T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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