Job Description P0AD70 Confidence 99.24% Date Thu Jan 5 11:20:09 GMT 2012 Rank 30 Aligned Residues 247 % Identity 16% Template d2cc1a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.13

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	.	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L
Query Conservation																		.
Alig confidence																		.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	D	D	Q	L	A	E	L	E	R	R	D	N	V	L	I	G	L	Y	A	A	N	L	Q	S	G	R	R	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	P	D	E	M	F	A	M	C	S	T	F	K	G	Y	V	A	A	R	V	L	Q	M	A	E	H	G	E	I	S	L	D	N	R	V
Template Known Secondary structure															T										T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G															T	T	S	S		T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
						113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	A	D	A	L	V	P	N	S	P	V	T	E	A	R	A	G	A	E	M	T	L	A	E	L	C	Q	A	A	L	Q	R	S	D	N	T	A	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G			S	S						T	T	T	T	S														S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y
Query Conservation
Alig confidence		.	.	.	.	.								.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.								.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	L	L	K	T	I	G	G	.	.	.	P	A	A	V	T	A	.	F	A	R	S	V	G	D	E	R	T	R	L	D	R	W	E	V	E	L	N	S	A	I	P	G	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	T	S	T	P	A	A	L	A	V	G	Y	R	A	I
Template Known Secondary structure		.	.	.	.	.						T		.	.	.							.					T	T			S					S		T	T	G	G	G	G			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.								.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							138	.	140	.	.	.	.				.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																	.															.	.
Query SS confidence																																																																	.															.	.
Query Sequence		L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	.	G	G	F	I	T	Y	M	A	M	I	P	Q	K	N	.	.
Query Conservation																																																																	.															.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.															.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	D	A	L	S	P	P	Q	R	G	L	L	E	D	W	M	R	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	S	S	M	R	A	G	L	P	E	G	W	T	T	A	D	K	T	G	S	G	D	Y	G	S	T	N	D	A	G	I	A	F	G	P	D	G	Q
Template Known Secondary structure				S	S	S	S														T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	G	G	G	G	S		T	T											S	T	T											T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
			346	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure		.										.
Query SS confidence		.										.
Query Sequence		.	I	G	A	F	V	V	V	T	R	.	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S
Query Conservation		.										.
Alig confidence		.										.
Template Conservation
Template Sequence		R	L	L	L	V	M	M	T	R	S	Q	A	H	D	P	K	A	E	N	L	R	P	L	I	G	E	L	T	A	L	V	L
Template Known Secondary structure												S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions