Job Description P0AD70 Confidence 94.16% Date Thu Jan 5 11:20:09 GMT 2012 Rank 82 Aligned Residues 180 % Identity 13% Template d2c5wb1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.55

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																			.	.	.	.	.	.	.									.	.										.	.	.
Query SS confidence																			.	.	.	.	.	.	.									.	.										.	.	.
Query Sequence		I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	.	.	.	.	.	.	.	M	A	L	V	V	I	D	G	.	.	N	Q	R	V	F	R	S	Y	G	.	.	.	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L
Query Conservation																			.	.	.	.	.	.	.									.	.										.	.	.
Alig confidence																			.	.	.	.	.	.	.									.	.										.	.	.																																	.	.
Template Conservation																																																																																.	.
Template Sequence		E	A	Q	K	H	L	W	D	I	Y	N	T	D	E	Y	V	A	Y	P	D	D	E	L	Q	V	A	S	T	I	V	D	V	S	N	G	K	V	I	A	Q	L	G	A	R	H	Q	S	S	N	V	S	F	G	I	N	Q	A	V	E	T	N	R	D	W	G	S	T	M	K	P	I	T	D	Y	A	P	A	L	.	.
Template Known Secondary structure														S	S	S				S		S	S										T	T	T		B								S	S						T	T				T	T	T				S			G	G	G						T						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.									.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		D	Q	G	T	V	K	L	N	D	P	L	S	K	Y	A	P	.	.	.	.	.	.	.	.	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		E	Y	G	V	Y	E	S	T	A	T	I	V	H	D	E	P	Y	N	Y	P	G	T	N	T	P	V	Y	N	W	D	R	G	Y	F	G	N	I	T	L	Q	Y	A	L	Q	Q	S	R	.	.	.	.	.	.	.	.	N	V	P	A	V	E	T	L	N	K	V	G	L	N	R	A	K	T	F	L	N	G	L	G	I
Template Known Secondary structure			T	T	S		S	B	S	S						S	S		B		T	T	S	S		B				T	T	S														T	T		.	.	.	.	.	.	.	.																						T	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.									430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	P	S	I	H	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	I	S	S	N	T	T	E	S	D	K	K
Template Known Secondary structure		B		S	S			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S					S	S			S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.																																																												.	.	.	.	.	.	.	470	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	A	S	S	E	K	M	A	A	A	Y	A	A	F	A	N	G	G	T	Y	Y	K	P	M	Y	I	H	K
Template Known Secondary structure		B	S															T	T	S						B	S
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions