Job Description P0AD70 Confidence 98.97% Date Thu Jan 5 11:20:09 GMT 2012 Rank 50 Aligned Residues 253 % Identity 15% Template d1xp4a2 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	A	T	G	M	A	L	V	V	I	.	.	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S	K	Y	A	P	P	G	A	R	V	P	T
Query Conservation												.	.
Alig confidence												.	.											.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	A	A	K	H	A	I	A	V	E	A	N	T	G	K	I	L	Y	E	K	D	.	.	.	.	.	.	.	.	.	.	.	.	A	T	Q	P	V	E	I	A	S	I	T	K	L	I	T	V	Y	L	V	Y	E	A	L	E	N	G	S	I	T	L	S	T	P	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	B	S	S						T	T	T	T							S	.	.	.	.	.	.	.	.	.	.	.	.		S	S					G	G	G	G															T	S	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	.	.	.	.	.	.	.	A	D	A	L	A	N
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	I	S	D	Y	P	Y	Q	L	T	T	N	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	N	I	P	X	E	A	R	N	Y	T	V	E	E	L	L	E	A	T	L	V	S	S	A	N	S	A	A	I	A	L	A	E
Template Known Secondary structure		.	.	.	.									T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					T	T
Template Predicted Secondary structure		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						82	.	.	.	.	.	.	.	90	.	.	.	.	.																													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	S	G	K	P	Y	T	Q	L	F	E	.	.	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S	D	F	Y	Q
Query Conservation													.	.
Alig confidence													.	.																			.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																																							.	.	.	.
Template Sequence		K	I	A	G	S	E	K	D	F	V	D	X	X	R	A	K	L	L	E	W	G	I	Q	D	A	T	V	V	N	T	T	.	.	.	.	.	.	.	G	L	N	N	E	T	L	G	D	N	I	Y	P	G	S	K	K	D	E	E	N	K	L	S	A	Y	D	V	A	I	V	A	R	N	L	I	K	K	.	.	.	.
Template Known Secondary structure					S	S															T	T			S		B				S	S	.	.	.	.	.	.	.				G	G	G	T	T	T		S		T	T			T	T																					.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																																							.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	T	Y	M	A	M	I	P	Q	K	.	.	.	N	I	G	A	F	V	V	V
Query Conservation																																																																							.	.	.
Alig confidence		.	.	.	.	.																																			.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.																																			.	.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	P	Q	V	L	E	I	T	K	K	P	S	S	T	F	A	G	X	T	I	T	S	T	N	Y	X	L	E	G	X	P	A	Y	R	.	.	.	.	.	.	G	G	F	D	G	L	K	T	G	T	T	D	K	A	G	E	S	F	V	G	T	T	V	E	K	G	X	R	V	I	T	V	V	L	N
Template Known Secondary structure		.	.	.	.	.		G	G	G					T		S					T	T						S		T	T	S	T	T	S	T	T			.	.	.	.	.	.	T	T										T	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
							199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	H	Q	D	N	N	P	Y	A	R	F	T	A	T	S	S	L	X	D	Y	I	S	S	T
Template Known Secondary structure					B	T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions