Job Description P0AD70 Confidence 99.33% Date Thu Jan 5 11:20:09 GMT 2012 Rank 22 Aligned Residues 248 % Identity 17% Template d1iysa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.65

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																	.																																																																.
Query SS confidence																	.																																																																.
Query Sequence		V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	.	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	.
Query Conservation																	.																																																																.
Alig confidence																	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	Q	Q	L	E	A	L	E	K	S	S	G	G	R	L	G	V	A	L	I	N	T	A	D	N	S	Q	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	A	D	E	R	F	A	M	C	S	T	S	K	V	M	A	A	A	A	V	L	K	Q	S	E	S	D	K	H	L	L	N	Q	R	V	E
Template Known Secondary structure														T	S									T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G	G													T	S		T	T	S	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
					113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D
Query Conservation		.	.	.
Alig confidence		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	K	S	D	L	V	N	Y	N	P	I	A	E	K	H	V	N	G	T	M	T	L	A	E	L	G	A	A	A	L	Q	Y	S	D	N	T	A	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G			S			T	T	G	G	G	G	T	T	S														S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L
Query Conservation
Alig confidence		.	.	.									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	K	L	I	A	H	L	G	G	.	.	.	.	P	D	K	V	T	A	F	A	R	S	L	G	D	E	T	F	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	T	E	P	T	L	N	T	A	I	P	G	D	P	R	D	T	T	T	P	L	A	M	A	Q	T	L	K	N	L	T
Template Known Secondary structure		.	.	.							T	S	.	.	.	.											T	T		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G				T	T			T	T
Template Predicted Secondary structure		.	.	.									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					137	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																.	.															.	.
Query SS confidence																																																																.	.															.	.
Query Sequence		S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	.	.	G	G	F	I	T	Y	M	A	M	I	P	Q	K	N	.	.
Query Conservation																																																																.	.															.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.															.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	K	A	L	A	E	T	Q	R	A	Q	L	V	T	W	L	K	G	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	S	I	R	A	G	L	P	K	S	W	V	V	G	D	K	T	G	S	G	D	Y	G	T	T	N	D	I	A	V	I	W	P	E	N	H	A	P
Template Known Secondary structure		T	S	S	S	S														T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	G	G	G	G	S		T	T	S										S	T	T											S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	.	.	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		L	V	L	V	T	Y	F	T	Q	P	E	Q	K	A	E	R	R	R	D	I	L	A	A	A	A	K	I	V	T	H	G	F
Template Known Secondary structure											S	S	T	T																T	T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions