Job Description P0AD70 Confidence 99.13% Date Thu Jan 5 11:20:09 GMT 2012 Rank 40 Aligned Residues 257 % Identity 16% Template d1e25a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.9

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	.	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S
Query Conservation																							.
Alig confidence																							.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	E	Q	I	E	S	I	V	I	G	K	K	A	T	V	G	V	A	V	W	G	P	D	D	L	E	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	P	F	E	K	F	P	M	Q	S	V	F	K	L	H	L	A	M	L	V	L	H	Q	V	D	Q	G	K	L	D	L	N	Q	T	V	I
Template Known Secondary structure											T	T	S	S	S									T	T		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T						G	G	G															T	T	S	S		T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		K	Y	A	P	P	G	A	R	V	P	.	.	.	.	.	.	.	.	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	R	A	K	V	L	Q	N	T	W	A	P	I	M	K	A	Y	Q	G	D	E	F	S	V	P	V	Q	Q	L	L	Q	Y	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	S	D	N
Template Known Secondary structure				T	T	T	S			S	S			T					S		S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																																									.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M
Query Conservation
Alig confidence												.	.	.	.	.	.									.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.									.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	C	D	L	L	F	E	L	V	.	.	.	.	.	.	G	G	P	A	A	L	H	D	.	Y	I	Q	S	M	G	I	K	E	T	A	V	V	A	N	E	A	Q	M	H	A	D	D	Q	V	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	W	T	S	M	K	G	A	A	E	I	L
Template Known Secondary structure												.	.	.	.	.	.	T								.					T	T			S	B													T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S
Template Predicted Secondary structure												.	.	.	.	.	.									.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																.	.	180	.	.	.	.	.	.	.	.	.	190
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	T	Y	M	A	M	I	P	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	F	E	Q	K	T	Q	L	S	E	T	S	Q	A	L	L	W	K	W	M	V	E	T	T	T	G	P	E	R	L	K	G	L	L	P	A	G	T	V	V	A	H	K	T	G	T	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	I	K	A	G	K	T	A	A	T	N	D	L	G	I	I	L	L	P	D
Template Known Secondary structure						T	T		S	S														S			S		T	T	S	T	T	T	T	S		T	T												.	.	.	.	.	.	.	.	.	.	.	.			T	T														T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		Q	K	N	I	G	A	F	V	V	V	T	R	S	P	L	T	R	.	.	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S	G	N	K
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		G	R	P	L	L	V	A	V	F	V	K	D	S	A	E	S	S	R	T	N	E	A	I	I	A	Q	V	A	Q	T	A	Y	Q	F	E	L	K	K
Template Known Secondary structure		S														S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions