Job Description P0AD70 Confidence 100.00% Date Thu Jan 5 11:20:09 GMT 2012 Rank 13 Aligned Residues 313 % Identity 20% Template c3tg9A_ PDB info PDB header:penicillin binding protein Chain: A: PDB Molecule:penicillin-binding protein; PDBTitle: the crystal structure of penicillin binding protein from bacillus2 halodurans Resolution 2.20 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	.	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S
Query Conservation																															.
Alig confidence																					.										.
Template Conservation																					.
Template Sequence		M	K	N	H	L	H	T	I	M	E	D	W	K	L	S	G	T	A	L	.	M	K	K	G	E	D	I	P	F	I	A	S	L	G	F	A	N	R	A	E	R	I	P	N	E	H	H	T	R	F	G	I	A	S	G	C	K	L	F	T	A	I	A	I	C	Q	L	V	E	A	G	K	L	S	F	D	T	P	L	S
Template Known Secondary structure														T							.				T	T	S								S				T	T	T	T					T	T		B				G	G	G	G															T	S			T	T		B	G	G
Template Predicted Secondary structure																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	.	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A
Query Conservation																																							.
Alig confidence								.	.	.	.	.	.	.																									.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		D	W	L	D	A	P	.	.	.	.	.	.	.	F	P	N	V	T	I	H	H	L	L	T	H	T	S	G	V	P	D	Y	F	D	E	D	L	W	K	D	V	P	M	Y	H	L	R	R	L	K	D	F	L	P	L	F	Q	H	A	P	M	K	F	P	P	G	H	R	F	H	Y	N	N	A	G	F	I	L	L	G
Template Known Secondary structure		G	T		S	S		.	.	.	.	.	.	.		T	T		B						T	T		S					S					G	G	G	T	S		G	G	G			S	G	G	G	G	G	G	G	T	T	T	S				S		T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	.	.	.	.	.	.	.	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	V	E	S	V	S	G	V	T	F	Q	E	Y	V	E	A	N	V	F	Q	R	A	G	M	H	E	S	G	Y	F	A	F	D	T	L	P	A	K	T	A	L	G	Y	I	D	L	E	D	G	S	W	K	T	N	L	Y	S	L	P	V	I	G	G	S	D	G	G	A	Y	V	T	A	E	D	M	M	K	L	W
Template Known Secondary structure									S	S										T					T		T	T		B			B	G	G	G			S	S	B								T	T	S					S	T	T	T	S		S	B			S	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	T	Y	M	A	M	I	P	Q	K	N
Query Conservation
Alig confidence								.	.	.	.	.	.																				.	.	.	.	.	.	.																	.
Template Conservation								.	.	.	.	.	.																				.	.	.	.	.	.	.																	.
Template Sequence		L	A	L	M	R	H	.	.	.	.	.	.	E	L	L	N	E	T	Y	T	Q	K	L	L	T	P	H	V	H	C	E	.	.	.	.	.	.	.	D	D	D	Y	Y	G	Y	G	V	W	I	K	Q	Q	D	G	.	A	I	S	K	Y	H	V	M	G	Y	D	P	G	V	C	F	H	S	A	F	Y	P	T	S	N
Template Known Secondary structure						T	T	.	.	.	.	.	.	S	S	S									T	S							.	.	.	.	.	.	.	T	T					S	S	S						T	T	.												T	T									T	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.																				.	.	.	.	.	.	.																	.
Template SS confidence
		240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		G	I	V	V	V	C	A	N	Q	S	S	G	.	.	.	.	.	.	A	Y	D	V	M	A	A	I	E	A	L	F
Template Known Secondary structure									S	B	S	S		.	.	.	.	.	.										T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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