Job Description P0AD70 Confidence 93.62% Date Thu Jan 5 11:20:09 GMT 2012 Rank 83 Aligned Residues 104 % Identity 11% Template c3lo7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein a; PDBTitle: crystal structure of pbpa from mycobacterium tuberculosis Resolution 2.05 Å

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		34	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.																									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure														.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	D	R	Y	A	D	H	I	F	Y	G	.	.	.	S	G	A	T	G	M	A	L	V	V	.	I	D	G	N	Q	R	V	F	R	S	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I
Query Conservation														.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	Q	Q	A	G	W	D	A	M	Q	Q	G	C	Y	G	P	C	K	G	A	V	V	A	L	E	P	S	T	G	K	I	L	A	L	V	S	S	P	S	Y	D	P	N	L	L	A	S	H	N	P	E	V	Q	A	Q	A	W	Q	R	L	G	D	N	P	A	S	P	L	T	N	R	A	I	S	E	T	Y	P	P
Template Known Secondary structure														B	T	T	B											T	T	T		B								S								T		S																T	T		T	T	S		T	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		G	S	T	F	K	V	I	T	T	A	A	.	.	.	A	L	A	A	G	A	T	E	T	E	Q	L	T	A	A	P	T	I	P	L	E	N	Y	P	C	G	D	E	P	T	V	S	L	R	E	A	F	V	K	S	C
Template Known Secondary structure		G	G	G	G								.	.	.				T	T			T	T							S	B				B					S	S	S	S										T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions