Job Description P0AD70 Confidence 91.75% Date Thu Jan 5 11:20:09 GMT 2012 Rank 86 Aligned Residues 109 % Identity 18% Template c3fwlA_ PDB info PDB header:transferase, hydrolase Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: crystal structure of the full-length transglycosylase pbp1b2 from escherichia coli Resolution 3.09 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																								.	.									.	.
Query SS confidence																								.	.									.	.
Query Sequence		E	F	A	S	D	I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	.	.	M	A	L	V	V	I	D	G	.	.	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G
Query Conservation																								.	.									.	.
Alig confidence																								.	.									.	.																																									.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	A	X	V	G	G	S	E	P	Q	F	A	G	Y	N	R	A	X	Q	A	R	R	S	I	G	S	L	A	K	P	A	T	Y	L	T	A	L	.	.	.	S	Q	P
Template Known Secondary structure																						S											T	T	T		B							S	S	S	S	T	T		S	S		T	T	T	S						G	G	G	G										.	.	.	T	S
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.				.	.	.
		105		.	.	.	.	110	.	.	.	.													.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure			.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	V	K	L	N	D	P	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S
Query Conservation			.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	N	D	D	R	R	Y	S	E	S	G	R	V	X	L	V	D	A	L	T	R	S	X
Template Known Secondary structure		S	S			T	T													S	S	S								T	T					T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions