Job Description P0AD70 Confidence 99.08% Date Thu Jan 5 11:20:09 GMT 2012 Rank 44 Aligned Residues 246 % Identity 17% Template c3dw0B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:class a carbapenemase kpc-2; PDBTitle: crystal structure of the class a carbapenemase kpc-2 at 1.62 angstrom resolution Resolution 1.60 Å

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		39	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.
Predicted Secondary structure													.																																																																.	.	.	.
Query SS confidence													.																																																																.	.	.	.
Query Sequence		A	D	H	I	F	Y	G	S	G	A	T	.	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	.	.	.	.	S
Query Conservation													.																																																																.	.	.	.
Alig confidence													.															.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	K	L	E	Q	D	F	G	G	S	I	G	V	Y	A	M	D	T	G	S	G	A	T	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	A	E	E	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	A	R	S	Q	Q	Q	A	G	L	L	D	T	P	I	R	Y	G	K	N
Template Known Secondary structure										T	S									T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G														T	T	S	T	T	T	T	T							G	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	P	W	S	P	I	S	E	K	Y	L	T	T	G	M	T	V	A	E	L	S	A	A	A	V	Q	Y	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	A	A	N	L	L	L	K
Template Known Secondary structure		G			S	S							T	T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																																									.	.	.	.	.	.	.	.	140
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S	D	F
Query Conservation
Alig confidence				.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	.	.	.	.	.	.	G	G	P	A	G	L	T	A	.	F	M	R	S	I	G	D	T	T	F	R	L	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	L	E	L	N	S	A	I	P	G	D	A	R	D	T	S	S	P	R	A	V	T	E	S	L	Q	K	L	T	L	G	S	A
Template Known Secondary structure			T	.	.	.	.	.	.	T								.					T	T		S	S		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	G	G	G				T	T			T	T																T	S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.							.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.																.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																										.	.	.															.	.
Query SS confidence																																																										.	.	.															.	.
Query Sequence		Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	.	.	.	G	G	G	G	F	I	T	Y	M	A	M	I	P	Q	.	.	K	N	I	G	A
Query Conservation																																																										.	.	.															.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.															.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	P	Q	R	Q	Q	F	V	D	W	L	K	G	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	H	R	I	R	A	A	V	P	A	D	W	A	V	G	D	K	T	G	T	C	G	V	Y	G	T	A	N	D	Y	A	V	V	W	P	T	G	R	A	P	I	V	L
Template Known Secondary structure		S														T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	G	G	G	G	S		T	T	S										S	S	T	T											T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		349	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		F	V	V	V	T	R	S	P	L	T	R	F	K	N	.	.	.	M	S	D	G	I	N	D	L	V	T	E	L	S	G	N
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		A	V	Y	T	R	A	P	N	K	D	D	K	H	S	E	A	V	I	A	A	A	A	R	L	A	L	E	G	L	G	V	N
Template Known Secondary structure								S	S	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions