Job Description P0AD70 Confidence 98.93% Date Thu Jan 5 11:20:09 GMT 2012 Rank 52 Aligned Residues 252 % Identity 14% Template c3cg5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the covalent adduct formed between tb2 b-lactamase and clavulanate Resolution 1.70 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	.	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S
Query Conservation																	.
Alig confidence																	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	D	R	F	A	E	L	E	R	R	Y	D	A	R	L	G	V	Y	V	P	A	T	G	T	T	A	A	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	A	D	E	R	F	A	F	C	S	T	F	K	A	P	L	V	A	A	V	L	H	Q	N	P	L	T	H	L	D	K	L	I	T	Y	T
Template Known Secondary structure													T	T											S	S						.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G	G												S		G	G	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.														.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		114	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		K	Y	A	P	.	.	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L
Query Conservation						.	.
Alig confidence						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	D	I	R	S	I	S	P	V	A	Q	Q	H	V	Q	T	G	M	T	I	G	Q	L	C	D	A	A	I	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	G	T	A	A
Template Known Secondary structure		G	G	G			S			T	T					T	T	T														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																																												.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	L	L	A	D	L	G	G	P	G	G	G	T	A	A	F	T	G	Y	L	R	S	L	G	D	T	V	S	R	L	D	A	E	E	P	E	L	N	R	D	P	P	G	D	E	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	P	H	A	I	A	L	V	L	Q	Q	L	V	L	G
Template Known Secondary structure										S	G	G	G	G											T	T			S							T	T	G	G	G				T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.				.	.	.	.	.	.
Predicted Secondary structure																																																															.										.	.	.
Query SS confidence																																																															.										.	.	.
Query Sequence		D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	.	G	F	I	T	Y	M	A	M	I	.	.	.	P	Q	K	N	I	G
Query Conservation																																																															.										.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	L	P	P	D	K	R	A	L	L	T	D	W	M	A	R	N	T	T	G	A	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	A	G	F	P	A	D	W	K	V	I	D	K	T	G	T	G	D	Y	G	R	A	N	D	I	A	V	V	W	S	P	T	G	V	P	Y	V
Template Known Secondary structure		S	S	S														T		S	S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		T	T	S										T	T	T											T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		348	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		A	F	V	V	V	T	R	.	.	.	.	.	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		V	A	V	M	S	D	R	A	G	G	G	Y	D	A	E	P	R	E	A	L	L	A	E	A	A	T	C	V	A	G	V	L	A
Template Known Secondary structure									G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions