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Job DescriptionP0AD70
Confidence98.81%DateThu Jan 5 11:20:09 GMT 2012
Rank55Aligned Residues222
% Identity18%Templatec2xftA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:orf12; PDBTitle: structural and mechanistic studies on a cephalosporin esterase from2 the clavulanic acid biosynthesis pathway
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.. .......120.........130........ .140.........
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Query Sequence  QLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPL. . . . . SKYAPPGARVPTYNGTPITLVNLATH. . . TSALPREQPGG
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Template Sequence  APERPMPTGAAYKLYLMRALVAEIEKGTVGWDEILTLTPELRSLPTGDMQDLPDGTRVTVRETAHKMIALS. . . . . . . . .
Template Known Secondary structure  STTS

GGGTSS
TT


GGG


SSSSGGGS
TT
T
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   164.....170.........180.........190.........200.........210.........220.........230....
 
   150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  AAHRPVFVWPTREQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPS. . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DNTGADLVADRLGR. . . . . . . EVVER. SLAAAGHHDPSLMRPFLTS
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S
GGGG
S


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   235....240........ .250... ......260.........270..
 
   226...230.........240.........250.........260.........270.........280
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . PDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQA
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Template Sequence  HEVFELGWGDPERRAEWVRQDEAGRRELLEKMAGVMTVRGSDLGATVHQLGIDWHMDAFDVVRVLEGLLQDSGRDTSGTV
Template Known Secondary structure  S



SS



GGG

S

GGGT
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TTS
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   273......280.........290.........300.........310.........320.........330.........340.........350..
 
   281........290.........300.........310.........320.........330.........340 .........350........
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Query Sequence  DRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAM. . IPQKNIGAFVVVTRSPLT
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Template Sequence  EEILT. . . . . . . . . . . . . . . . . . . . . . . . AYPGLLIDEERWRRVYFKAGSSPGVMMFCWLLQDHAGISYVLVLRQSADEQ
Template Known Secondary structure  ........................S

SS


TTTTTTTS
SSG
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   353.... ..360.........370.........380.........390.........400........
 
   359360.........370....
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Query Sequence  RFKNMSDGINDLVTEL
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Template Sequence  RLIGDGLFLRGIGAKI
Template Known Secondary structure  GGTTTS
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   409410.........420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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