Job Description P0AD70 Confidence 99.20% Date Thu Jan 5 11:20:09 GMT 2012 Rank 32 Aligned Residues 256 % Identity 14% Template c2v20A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase tem; PDBTitle: structure of a tem-1 beta-lactamase insertant2 allosterically regulated by kanamycin and anions. complex3 with sulfate. Resolution 1.67 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	E	F	A	S	D	I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	I	D	.	.	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T
Query Conservation																																.	.
Alig confidence																																.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	T	L	V	K	V	K	D	A	E	D	Q	L	C	R	T	S	H	R	P	C	R	V	G	Y	I	E	L	D	L	N	S	G	K	I	L	E	S	F	R	.	.	.	.	.	.	.	.	.	.	.	.	P	E	E	R	F	P	M	M	S	T	F	K	V	L	L	C	G	A	V	L	S	R	I	D	A	G	Q
Template Known Secondary structure																	T	T			S											T	T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S					G	G	G															T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	K	L	N	D	P	L	.	.	.	.	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	G	R	R	I	H	Y	S	Q	N	D	L	V	K	Y	S	P	V	T	E	K	H	L	T	D	G	M	T	V	R	E	L	C	S	A	A	I	T	M	S	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T							G	G	G			S	S		T	T	G	G	G		T	T	T														S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	S	N	L	A	F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.													.	.	.							.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.													.	.	.							.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	A	A	N	L	L	L	T	T	I	G	G	.	.	.	P	K	E	L	T	A	.	F	L	H	N	M	G	D	H	V	T	R	L	D	R	W	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	N	E	A	I	P	N	D	E	R	D	T	T	M	P	V	A	M
Template Known Secondary structure		.	.	.	.	.	.	.											T	S	.	.	.							.					T	T			S					S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G				T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.							.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									113	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	R	W	M	Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	.	G	F	I	T	Y	M	A	M
Query Conservation																																																																									.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	T	L	R	K	L	L	T	G	E	L	L	T	L	A	S	R	Q	Q	L	I	D	W	M	E	A	D	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	P	L	L	R	S	A	L	P	A	G	W	F	I	A	D	K	S	G	A	G	R	R	G	S	R	G	I	I	A	A
Template Known Secondary structure											S	S	S	S														T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T							T	T											S	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		341			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		I	.	.	P	Q	K	N	I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		L	G	P	D	G	K	P	S	R	I	V	V	I	Y	T	T	G	S	R	K	K	T	D	E	R	N	R	Q	I	A	E	I	G	A	S	L	I
Template Known Secondary structure				S	T	T	S											S			S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions