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Job DescriptionP0AD70
Confidence100.00%DateThu Jan 5 11:20:09 GMT 2012
Rank9Aligned Residues328
% Identity21%Templatec2qz6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: first crystal structure of a psychrophile class c beta-2 lactamase
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  FASDIVDRYADHIFYGSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLN
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Template Sequence  DIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQYFNYGVANKDSKQPITENTLFEIGSVSKTFTATLAGYALANGKLKLS
Template Known Secondary structure 
TT
STTBS
TTT

B

TT
B
GGGTTS

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  DPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQAAYSNLAFD
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Template Sequence  DPASQYLPAL. . . RGDKFDHISLLNLGTYTAGGLPLQF. . . . . . . . . . . . PTGKMISYYQHWKPAFAPGTQRLYSNPSIG
Template Known Secondary structure  SBGGGG
GGG...TTSGGGSSBTT
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SS
TTT


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   87..90...... ...100.........110.........120. ........130.........140.........150.
 
   190.........200.........210.........220.........230......... 240.........250.........260......
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Query Sequence  LLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGA. . . SPCNNTLAAIGSGGVYSTPGDMMRWMQ
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Template Sequence  LFGHLAAQSLGQPFEKLMEQTVLPKLGLKHTFISVPETQMSLYAQGYDKAGKPVRVSPGALDAEAYGIKTSTSDLIHYVE
Template Known Secondary structure  TTTS
TTTGGGT
SSSS

GGGGGGB


B
TTS
B





TTT


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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   267..270.........280.........290........ .300.........310.........320........
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Query Sequence  QYLSSDFYQRSNQADRMQTLIYQRAQFTKVIG. . . . . . . . . . . . . . . . . . MDVPGKADALGLGWVYMAPKEGRPGIIQKT
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Template Conservation    
                            
 
                                            
 
Template Sequence  VNMHPAKLEKPLQQAIAATHTGYYTVDGMTQGLGWEMYPYPIKVDALVEGNSTQMAMEPHKVNWLTPPQAAPLDTLVNKT
Template Known Secondary structure 
GGGS
TSTT
SS
SS

T
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   329330.........340.........350.........360.........370....
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Query Sequence  GGGGGFITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTEL
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Template Sequence  GSTGGFGAYVAYVPSKGLGVVILANKNYPNAER. . VKAAHAILSAM
Template Known Secondary structure 
SS
TTTTSB


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   317..320.........330.........340......... 350.........360
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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