Job Description P0AD70 Confidence 99.26% Date Thu Jan 5 11:20:09 GMT 2012 Rank 28 Aligned Residues 251 % Identity 18% Template c2qpnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase ges-1; PDBTitle: ges-1 beta-lactamase Resolution 1.10 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	.	T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L
Query Conservation																	.
Alig confidence																	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	K	T	D	L	E	K	L	E	R	E	K	A	A	Q	I	G	V	A	I	V	D	P	Q	G	E	I	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	M	A	Q	R	F	A	M	C	S	T	F	K	F	P	L	A	A	L	V	F	E	R	I	D	S	G	T	E	R	G	D	R	K	L
Template Known Secondary structure															T										T	T							.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G	G															T	S	S		T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		S	K	Y	A	P	P	G	A	R	V	P	T	.	.	.	.	.	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	G	P	D	M	I	V	E	W	S	P	A	T	E	R	F	L	A	S	G	H	M	T	V	L	E	A	A	Q	A	A	V	Q	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	G	A
Template Known Secondary structure					G	G	G			S	S								T	T	T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																																									.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q
Query Conservation
Alig confidence										.	.	.	.	.	.									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	L	L	L	R	E	I	.	.	.	.	.	.	G	G	P	A	A	M	T	Q	.	Y	F	R	K	I	G	D	S	V	S	R	L	D	R	K	E	P	E	M	G	D	N	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	R	D	T	T	T	P	I	A	M	A	R	T	V	A	K
Template Known Secondary structure										.	.	.	.	.	.	T								.					T	T		S	S							T	T	G	G	G				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T
Template Predicted Secondary structure										.	.	.	.	.	.									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	.	.	.	T	Y	M	A	M	I	P	Q	K
Query Conservation																																																																						.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	Y	G	G	A	L	T	S	T	S	T	H	T	I	E	R	W	L	I	G	N	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	T	L	R	A	G	F	P	K	D	W	V	V	G	E	K	T	G	T	C	A	N	G	G	R	N	D	I	G	F	F	K	A	Q	E	R
Template Known Secondary structure				T	S	S	S	S														T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	G	G	G	G	S		T	T	S										T	T	T											T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		N	I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	K	N	.	.	.	M	S	D	G	I	N	D	L	V	T	E	L	S	G	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		D	Y	A	V	A	V	Y	T	T	A	P	K	L	S	A	V	E	R	D	E	L	V	A	S	V	G	Q	V	I	T	Q	L	I	L	S	T
Template Known Secondary structure												T	T	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions