Job Description P0AD70 Confidence 99.27% Date Thu Jan 5 11:20:09 GMT 2012 Rank 26 Aligned Residues 246 % Identity 18% Template c2ov5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carbapenemase; PDBTitle: crystal structure of the kpc-2 carbapenemase Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	F	A	K	L	E	Q	D	F	G	G	S	I	G	V	Y	A	M	D	T	G	S	G	A	T	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	A	E	E	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	A	R	S	Q	Q	Q	A	G	L	L	D	T	P	I	R	Y	G
Template Known Secondary structure												T	S									T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S					G	G	G															S	S	T	T	S	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
			113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L
Query Conservation		.
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	A	L	V	P	W	S	P	I	S	E	K	Y	L	T	T	G	M	T	V	A	E	L	S	A	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	S	D	N	A	A	A	N	L	L
Template Known Secondary structure		G	G	G			S	S							T	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																									.	.	130	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S
Query Conservation
Alig confidence						.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	E	L	.	.	.	.	.	.	G	G	P	A	G	L	T	A	.	F	M	R	S	I	G	D	T	T	F	R	L	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	L	E	L	N	S	A	I	P	G	D	A	R	D	T	S	S	P	R	A	V	T	E	S	L	Q	K	L	T	L	G
Template Known Secondary structure					T	.	.	.	.	.	.	T								.					T	T		S	S		B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	G	G	G				T	T			T	T																T	S
Template Predicted Secondary structure						.	.	.	.	.	.									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.							.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.																.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.		.	.			.	.	.
Predicted Secondary structure																																																												.	.													.			.	.
Query SS confidence																																																												.	.													.			.	.
Query Sequence		D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	.	.	G	G	G	G	F	I	T	Y	M	A	M	I	.	P	Q	.	.	K	N	I
Query Conservation																																																												.	.													.			.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.													.			.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	L	A	A	P	Q	R	Q	Q	F	V	D	W	L	K	G	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	H	R	I	R	A	A	V	P	A	D	W	A	V	G	D	K	T	G	T	C	G	V	Y	G	T	A	N	D	Y	A	V	V	W	P	T	G	R	A	P	I
Template Known Secondary structure		S	S	S														T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	G	G	G	G	S		S	S	S										S	S	T	T											T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		G	A	F	V	V	V	T	R	.	.	.	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		V	L	A	V	Y	T	R	A	P	N	K	D	D	K	H	S	E	A	V	I	A	A	A	A	R	L	A	L	E	G	L
Template Known Secondary structure										S	S	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions