Job Description P0AD70 Confidence 99.14% Date Thu Jan 5 11:20:09 GMT 2012 Rank 39 Aligned Residues 242 % Identity 22% Template c1z6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:penicillin-binding protein 5; PDBTitle: crystal structure of penicillin-binding protein 5 from e. coli in2 complex with a boronic acid inhibitor Resolution 1.60 Å

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		47	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	A	T	G	M	A	L	V	V	I	D	G	.	.	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S	K	Y	A	P	P	G	A	R	V	P	T
Query Conservation														.	.
Alig confidence														.	.									.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	D	A	E	S	Y	I	L	I	D	Y	N	S	G	K	V	L	A	E	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	R	R	D	P	A	S	L	T	K	M	M	T	S	Y	V	I	G	Q	A	M	K	A	G	K	F	K	E	T	D	L	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S									T	T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	T	T			B			G	G	G															T	T	S			T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T
Query Conservation
Alig confidence		.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		.	.	.	.	.	.	T	I	G	N	D	A	W	A	T	G	N	.	P	V	F	K	G	S	S	L	M	F	L	K	P	G	M	Q	V	P	V	S	Q	L	I	R	G	I	N	L	Q	S	.	.	.	.	.	.	.	.	.	.	.	G	N	D	A	C	V	A	M	A	D	F	A	.	A	G	S	Q	D	A	F	V
Template Known Secondary structure		.	.	.	.	.	.				G	G	G		G	G	G		.	G	G	G	T	T	S							T	T														T	T		.	.	.	.	.	.	.	.	.	.	.													.		S	S
Template Predicted Secondary structure		.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
								70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110												.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q
Query Conservation
Alig confidence							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		G	L	M	N	S	.	Y	V	N	A	L	G	L	K	N	T	H	F	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	G	L	D	A	D	G	Q	Y	S	S	A	R	D	M	A	L	I	G	Q	A	L	I	R	D	.	.	.	.	.	.	.	.	.	V	P	N	E
Template Known Secondary structure							.					T	T		S	S		B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					T	T		B	B																.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.																						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	T	Y	M	A	M	I	P	Q	K	N	I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	K	N	M	S
Query Conservation
Alig confidence																																.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		Y	S	I	Y	K	E	K	E	F	T	F	N	G	I	R	Q	L	N	R	N	G	L	L	W	D	N	S	L	N	V	.	.	.	.	.	.	D	G	I	K	T	G	H	T	D	K	A	G	Y	N	L	V	A	S	A	T	E	G	Q	M	R	L	I	S	A	V	M	G	G	R	T	F	K	G	R	E	A	E	S	K
Template Known Secondary structure			G	G	G	G							T	T						S		G	G	G	G		T	T	S			.	.	.	.	.	.									T	T	T											T	T													S	T	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		365	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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