Job Description P0AD70 Confidence 98.84% Date Thu Jan 5 11:20:09 GMT 2012 Rank 53 Aligned Residues 246 % Identity 20% Template c1w7fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the class a beta-lactamase bs32 inhibited with isocitrate Resolution 1.80 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S	.	.
Query Conservation																																																																																.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	F	A	K	L	E	E	Q	F	D	A	K	L	G	I	F	A	L	D	T	G	T	N	R	T	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	P	D	E	R	F	A	F	A	S	T	I	K	A	L	T	V	G	V	L	L	Q	Q	K	S	I	E	D	L	N	Q	R	I	T	Y	T	R	D
Template Known Secondary structure												T										T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T						G	G	G													S		T	T	G	G	G							T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		D	L	V	N	Y	N	P	I	T	E	K	H	V	D	T	G	M	T	L	K	E	L	A	D	A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	S	D	N	T	A	Q	N	L	I	.	.
Template Known Secondary structure		S			S			T	T	G	G	G	G	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																									.	.	130	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S	S	D	F
Query Conservation
Alig confidence		.							.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.							.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	K	Q	I	G	G	.	.	.	P	E	S	L	K	K	.	E	L	R	K	I	G	D	E	V	T	N	P	E	R	F	E	P	E	L	N	E	V	N	P	G	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	T	S	T	A	R	A	L	A	T	S	L	Q	A	F	A	L	E	D	K
Template Known Secondary structure		.				T	T		.	.	.							.					T	T			S							T	T	G	G	G				T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	S	S	S
Template Predicted Secondary structure		.							.	.	.							.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			139	140	.	.	.	.				.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.		.	.			.	.	.	.	.	.
Predicted Secondary structure																																																												.											.			.	.
Query SS confidence																																																												.											.			.	.
Query Sequence		Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	.	G	G	F	I	T	Y	M	A	M	I	.	P	Q	.	.	K	N	I	G	A	F
Query Conservation																																																												.											.			.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.											.			.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	S	E	K	R	E	L	L	I	D	W	M	K	R	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	L	I	R	A	G	V	P	E	G	W	E	V	A	D	K	T	G	A	G	S	Y	G	T	R	N	D	I	A	I	I	W	P	P	K	G	D	P	V	V	L	A
Template Known Secondary structure		S														T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	G	G	G	G	S		T	T											T	T	T											S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		350	.	.	.	.	.	.				.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		V	V	V	T	R	S	P	.	.	.	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		V	L	S	S	R	D	K	K	D	A	K	Y	D	D	K	L	I	A	E	A	T	K	V	V	V	K	A	L
Template Known Secondary structure							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions