Job Description P0AD70 Confidence 99.15% Date Thu Jan 5 11:20:09 GMT 2012 Rank 38 Aligned Residues 167 % Identity 23% Template c1tvfA_ PDB info PDB header:penicillin binding Chain: A: PDB Molecule:penicillin binding protein 4; PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4)2 from staphylococcus aureus Resolution 2.00 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P	L	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	S	A	V	N	V	S	Q	T	G	Q	L	L	Y	Q	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	K	W	N	P	A	S	M	T	K	L	M	T	M	Y	L	T	L	E	A	V	N	K	G	Q	L	S	L	D	D	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S							T	T	S	B						S	.	.	.	.	.	.	.	.	.	.	.	.	T	T			B			G	G	G															T	T	S	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.													.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D	L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E
Query Conservation
Alig confidence		.	.																										.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation		.	.																										.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		.	.	T	M	T	N	K	E	Y	I	M	S	T	L	P	E	L	S	N	T	K	L	Y	P	G	Q	V	.	.	.	W	T	I	A	D	L	L	Q	I	T	V	S	N	S	.	.	.	.	.	.	.	.	.	.	.	S	N	A	A	A	L	I	L	A	K	K	V	.	.	.	.	S	K	N	T	S	D	F	V	D
Template Known Secondary structure		.	.										T	T		T	T	S							T	T			.	.	.													S		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	S	S	S
Template Predicted Secondary structure		.	.																										.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
				101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160
		209	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		E	Q	I	.	.	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W	M	Q	Q	Y	L	S
Query Conservation					.	.
Alig confidence					.	.																																			.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		L	M	N	N	K	A	K	A	I	G	M	K	N	T	H	F	V	N	P	T	G	A	E	N	S	R	L	R	S	F	A	P	T	K	Y	K	D	Q	E	.	.	.	.	.	.	.	R	T	V	T	T	A	R	D	Y	A	I	L	D	L	H	V	I	K
Template Known Secondary structure										T	T		T	T		B		S	S	S	S	S	S						G	G	G	S		G	G	G	T	T			.	.	.	.	.	.	.			B	B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions