Job Description P0AD70 Confidence 100.00% Date Thu Jan 5 11:20:09 GMT 2012 Rank 5 Aligned Residues 326 % Identity 18% Template c1ei5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-aminopeptidase; PDBTitle: crystal structure of a d-aminopeptidase from ochrobactrum2 anthropi Resolution 1.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	I	V	D	R	Y	A	D	H	I	F	Y	G	S	G	A	T	G	M	A	L	V	V	I	D	G	N	Q	R	V	F	.	R	S	Y	G	E	T	R	P	G	N	N	V	R	P	Q	L	D	S	V	V	R	I	A	S	L	T	K	L	M	T	S	E	M	L	V	K	L	L	D	Q	G	T	V	K	L	N	D	P
Query Conservation																																	.
Alig confidence																																	.																																												.
Template Conservation																																																																													.
Template Sequence		S	A	L	E	A	F	V	R	H	I	P	Q	N	Y	K	G	P	G	G	V	V	A	V	V	K	D	G	E	V	V	L	Q	H	A	W	G	F	A	D	L	R	T	R	T	P	M	T	L	D	T	R	M	P	I	C	S	V	S	K	Q	F	T	C	A	V	L	L	D	A	V	G	E	P	E	L	.	L	D	D	A
Template Known Secondary structure										T					S		S	S									T	T													T	T	T	T					T	T						G	G	G													T		S	G	G	G	.	G
Template Predicted Secondary structure																																																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																				.
Query SS confidence																																												.																				.
Query Sequence		L	S	K	Y	A	P	P	G	A	R	V	P	T	Y	N	G	T	P	I	T	L	V	N	L	A	T	H	T	S	A	L	P	R	E	Q	P	G	G	A	A	H	R	.	P	V	F	V	W	P	T	R	E	Q	R	W	K	Y	L	S	T	A	K	.	L	K	A	A	P	G	S	Q	A	A	Y	S	N	L	A	F	D
Query Conservation																																												.																				.
Alig confidence										.	.	.	.	.	.																													.																				.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	E	A	Y	L	D	K	F	.	.	.	.	.	.	E	D	E	R	P	A	V	R	D	L	C	N	N	Q	S	G	L	R	D	Y	W	A	L	S	V	L	C	G	A	D	P	E	G	V	F	L	P	A	Q	A	Q	S	L	L	R	R	L	K	T	T	H	F	E	P	G	S	H	Y	S	Y	C	N	G	N	F	R
Template Known Secondary structure						T	T	T		.	.	.	.	.	.		S										T	T		S												T	T			T	T			B											T					S	S		T	T	S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		L	L	A	D	A	L	A	N	A	S	G	K	P	Y	T	Q	L	F	E	E	Q	I	T	R	P	L	G	M	K	D	T	T	Y	T	P	S	P	D	Q	C	R	R	L	M	V	A	E	R	G	A	.	.	.	.	.	S	P	C	N	N	T	L	A	A	I	G	S	G	G	V	Y	S	T	P	G	D	M	M	R	W
Query Conservation																																																				.	.	.	.	.
Alig confidence																																												.								.	.	.	.	.
Template Conservation																																												.
Template Sequence		I	L	A	D	L	I	E	A	H	T	G	R	T	L	V	D	I	L	S	E	R	I	F	A	P	A	G	M	K	R	A	E	L	I	S	D	T	A	L	F	D	E	.	C	T	G	Y	E	G	D	T	V	R	G	F	L	P	A	T	N	R	I	Q	W	M	G	D	A	G	I	C	A	S	L	N	D	M	I	A	W
Template Known Secondary structure												T	S										T					T		T	T						B	G	G	G			S	.	S							T	T	T									B	B			S	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Q	Y	L	S	S	D	F	Y	Q	R	S	N	Q	A	D	R	M	Q	T	L	I	Y	Q	R	A	Q	F	T	K	V	I	G	M	D	V	P	G	K	A	D	A	L	G	L	G	W	V	Y	M	A	P	K	E	G	R	P	G	I	I	Q	K	T	G	G	G	G	G	F	I	T	Y	M	A	M	I	P	Q	K
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		E	Q	F	I	D	A	T	R	D	D	E	S	G	L	Y	R	R	L	S	G	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	F	K	D	G	V	A	A	P	Y	G	F	G	L	N	L	H	E	T	G	.	.	G	K	R	L	T	G	H	G	G	A	L	R	G	W	R	C	Q	R	W	H	C	A	D	E
Template Known Secondary structure								T	T	T		T	T	S						S	S		.	.	.	.	.	.	.	.	.	.	.	.		B		T	T	S		B		S			T	T							T	.	.	T											T	T									G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.													260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	G	A	F	V	V	V	T	R	S	P	L	T	R	F	K	N	M	S	D	G	I	N	D	L	V	T	E	L	S	G	N	K	P	L	V	I	P	A	S
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		R	L	S	T	I	A	M	F	N	F	E	G	G	A	.	.	.	.	.	S	E	V	A	F	K	L	M	N	I	A	L	G	V	S	S	S	E	V	S	R	V
Template Known Secondary structure		T								S	B	S	S			.	.	.	.	.													T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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