Job Description P77700 Confidence 99.70% Date Thu Jan 5 12:31:50 GMT 2012 Rank 14 Aligned Residues 201 % Identity 10% Template c3oxnD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus Resolution 2.70 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	I	E	A	R	V	R	I	C	I	N	Q	L	L	Y	T	P	K	H	T	A	R	L	L	Q	V	L	K	K	Q	F	P	T	C	Q	I	T	V	T	T	E	V	Y	N	G	V	W	D	A	I	I	N	N	Q	A	N	I	A	I	G	A	P	D	T	L	L	D	G	G	G	I	D	Y	T	E	I	G	A	I
Query Conservation
Alig confidence																								.																																								.	.
Template Conservation																								.																																								.	.
Template Sequence		Q	Q	C	D	Q	T	F	T	I	A	T	T	D	Y	A	X	Q	T	I	L	P	F	.	A	L	P	R	I	Y	Q	E	A	P	N	V	S	F	N	F	L	P	L	Q	H	D	R	L	S	D	Q	L	T	Y	E	G	A	D	L	A	I	C	R	.	.	P	T	G	P	V	E	P	L	R	S	E	I	L	G	R	V
Template Known Secondary structure			S																T					.										T	T										G	G	G							T	S			S						.	.		S	S			T	T	S
Template Predicted Secondary structure																								.																																								.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		R	W	A	F	A	I	A	P	D	H	P	L	A	F	V	P	E	P	I	A	E	S	Q	L	R	L	Y	P	N	I	M	V	E	D	T	A	H	T	I	N	K	K	V	G	W	L	L	H	.	.	.	G	Q	E	S	I	L	V	P	D	F	N	T	K	C	Q	C	Q	I	L	G	E	G	I	G	F	L	P	D	Y
Query Conservation																																																		.	.	.
Alig confidence																		.	.																															.	.	.
Template Conservation																		.	.
Template Sequence		G	V	L	C	L	L	S	K	Q	H	P	L	A	N	Q	E	.	.	X	S	L	D	D	Y	L	S	H	P	H	A	X	I	A	I	S	D	G	V	K	A	L	I	E	Q	A	L	I	D	K	P	Q	R	K	X	V	L	R	A	Y	H	L	E	A	A	L	A	I	V	D	T	L	P	I	I	I	T	V	P	A	D
Template Known Secondary structure									T	T	S	G	G	G	S	S		.	.									S						S													T	S	S	S										S										T	T	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		M	V	R	E	A	M	T	Q	S	L	L	V	T	R	Q	I	H	N	P	R	Q	D	S	R	M	L	L	A	T	Q	H	.	S	A	T	G	Q	V	T	Q	W	I	K	K	Q	F	A	P	N	G
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		L	A	Y	L	V	A	E	R	Y	D	L	V	V	K	P	L	P	F	Q	F	T	P	F	D	Y	S	X	I	W	H	A	R	C	E	H	S	P	A	Q	E	W	L	R	S	V	V	R	E	E	C
Template Known Secondary structure											T							S	S													G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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