Job Description P77700 Confidence 99.12% Date Thu Jan 5 12:31:50 GMT 2012 Rank 36 Aligned Residues 181 % Identity 10% Template c2qsxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus Resolution 1.64 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	I	C	I	N	Q	L	L	Y	T	P	K	H	T	A	R	L	L	Q	V	L	K	K	Q	F	P	T	C	Q	I	T	V	T	T	E	V	Y	N	G	V	W	D	A	I	I	N	N	Q	A	N	I	A	I	G	A	P	D	T	L	L	D	G	G	G	I	D	Y	T	E	I	G	A	I	R	W	A	F	A	I
Query Conservation
Alig confidence																		.																					.	.	.	.	.	.	.	.	.
Template Conservation																		.																					.	.	.	.	.	.	.	.	.
Template Sequence		L	V	V	D	V	T	P	S	F	A	S	L	W	L	V	P	.	N	I	N	D	F	H	Q	R	H	P	N	I	R	V	K	I	L	T	G	D	.	.	.	.	.	.	.	.	.	G	A	V	G	E	S	D	L	H	V	R	C	L	P	L	S	T	H	Y	E	Y	S	Q	L	L	C	E	E	T	L	L	L	I	G
Template Known Secondary structure														T				.										T	T										.	.	.	.	.	.	.	.	.	S						S								S		S			T	T
Template Predicted Secondary structure																		.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	H	P	L	A	F	V	P	E	P	I	A	E	S	Q	L	R	L	Y	P	N	I	M	V	E	D	T	A	H	T	I	N	K	K	V	G	W	L	L	H	G	Q	E	S	I	L	V	P	D	F	N	T	K	C	Q	C	Q	I	L	G	E	G	I	G	F	L	P	D	Y	M	V	R	E	A	M	T	Q	S
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		N	T	N	L	P	.	.	.	.	.	.	.	.	K	N	Q	A	I	S	H	Y	P	F	I	P	Q	T	T	R	P	Q	L	W	E	Q	F	K	Q	E	N	D	I	T	Y	H	S	V	G	F	E	H	F	Y	L	A	C	E	A	V	R	X	E	K	G	L	A	L	L	P	D	F	X	A	Q	F	S	I	L	R	G
Template Known Secondary structure			T	T	S		.	.	.	.	.	.	.	.				G	G	G	G	S		B			B	T	T		T														B		S			B	S	S										T	T			B														T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	L	V	T	R	Q	I	H	N	P	R	Q	D	S	R	M	L	L	A	T	Q	H	.	S	A	T	G	Q	V	T	Q	W	I	K	K	Q	F	A	P	N
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		D	I	Q	H	I	G	N	L	K	L	H	S	G	Y	G	Y	Y	V	V	I	P	N	F	R	L	T	S	R	K	V	A	L	F	H	D	W	L	K	D	K
Template Known Secondary structure		S																					G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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