Job Description P77700 Confidence 100.00% Date Thu Jan 5 12:31:50 GMT 2012 Rank 1 Aligned Residues 287 % Identity 16% Template c2esnC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	S	I	F	T	E	E	N	L	L	A	F	T	T	A	A	R	F	G	S	F	S	K	A	A	E	E	L	G	L	T	T	S	A	I	S	Y	T	I	K	R	M	E	T	G	L	D	V	V	L	F	T	R	S	T	R	S	I	E	L	T	E	S	G	R	Y	F	F	R	K	A	T	D	L	L	N	D	F	Y
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		L	R	R	L	.	D	L	N	L	L	L	V	F	D	A	L	Y	R	H	R	N	V	G	T	A	A	S	E	L	A	I	S	A	S	A	F	S	H	A	L	G	R	L	R	Q	G	L	D	D	E	L	F	L	R	Q	G	N	R	M	Q	P	T	Q	R	A	E	H	L	A	A	A	V	A	A	A	L	R	A	L	G
Template Known Secondary structure					S	.		T	T												S										T	S																T	T	S							T	T
Template Predicted Secondary structure						.
Template SS confidence
		5	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	R	R	I	D	T	I	S	Q	G	I	E	A	R	V	R	I	C	I	N	Q	L	L	Y	T	P	K	H	T	A	R	L	L	Q	V	L	K	K	Q	F	P	T	C	Q	I	T	V	T	T	E	V	Y	N	G	V	W	D	A	I	I	N	N	Q	A	N	I	A	I	G	A	P	D	T	L	L	D	G	G
Query Conservation
Alig confidence																																																																													.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		E	G	L	E	E	W	R	P	F	V	P	G	Q	S	Q	R	T	F	V	F	A	A	T	D	Y	T	A	F	A	L	L	P	P	L	M	N	R	L	Q	H	S	A	P	G	V	R	L	R	L	V	N	A	E	R	K	L	S	V	E	A	L	A	S	G	R	I	D	F	A	L	G	Y	D	R	L	.	.	.	P	E
Template Known Secondary structure						T	T	S				T	T	T																														T	T									S	S	S								T	T	S		S									.	.	.		T
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		G	I	D	Y	T	E	I	G	A	I	R	W	A	F	A	I	A	P	D	H	P	L	A	F	V	P	E	P	I	A	E	S	Q	L	R	L	Y	P	N	I	M	V	E	D	T	A	H	.	.	.	.	T	I	N	K	K	V	G	W	L	L	H	G	Q	E	S	I	L	V	P	D	F	N	T	K	C	Q	C	Q	I
Query Conservation																																																	.	.	.	.
Alig confidence																												.	.																				.	.	.	.
Template Conservation																												.	.
Template Sequence		G	I	Q	A	H	D	W	F	A	D	R	Y	V	V	V	A	R	R	D	H	P	R	L	A	G	A	.	.	P	T	L	E	G	Y	L	A	E	R	H	A	V	V	T	P	W	N	E	D	S	G	V	I	D	R	L	L	A	R	S	G	L	R	R	E	V	A	V	Q	L	P	T	V	L	A	A	L	F	L	A	G
Template Known Secondary structure		T																	T	T		T	T		S	S	S	.	.								T	S							T	T			S	S									T	T	T										S
Template Predicted Secondary structure																												.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	G	I	G	F	L	P	D	Y	M	V	R	E	A	M	T	Q	S	L	L	V	T	R	Q	I	H	N	P	R	Q	D	S	R	M	L	L	A	T	Q	H	S	A	T	G	Q	V	T	Q	W	I	K	K	Q	F	A	P
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		S	T	D	F	L	L	T	A	P	R	H	A	A	R	A	L	A	E	A	A	G	L	A	L	Y	P	A	P	F	D	I	P	P	Y	V	L	R	L	Y	S	H	V	Q	H	.	R	D	A	H	A	W	M	I	G	Q	L	K	G
Template Known Secondary structure		T	S	S																		T							S	S													T	T		.											T	T	S
Template Predicted Secondary structure																																														.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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