Job Description P77700 Confidence 97.02% Date Thu Jan 5 12:31:50 GMT 2012 Rank 93 Aligned Residues 89 % Identity 15% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.	.	.	.																																							.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																							.	.	.	.	.	.	.
Query Sequence		F	T	E	E	N	L	L	A	F	T	T	A	A	R	F	G	.	.	.	.	S	F	S	K	A	A	E	E	L	G	L	T	T	S	A	I	S	Y	T	I	K	R	M	E	T	G	L	D	V	V	L	F	T	R	S	T	R	S	.	.	.	.	.	.	.	I	E	L	T	E	S	G	R	Y	F	F	R	K	A	T
Query Conservation																		.	.	.	.																																							.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																										.	.	.											.	.	.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	.	.	.	H	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V
Template Known Secondary structure		S													S		S		S											S	S	S		G	G	G	T										.	.	.	T	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	N	D	F	Y	A	I	K	R	R	I	D	T	I	S	Q	G	I	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P	K
Template Known Secondary structure															T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions