Job Description P13979 Confidence 3.64% Date Thu Jan 5 11:33:52 GMT 2012 Rank 65 Aligned Residues 34 % Identity 21% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		42	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		E	T	I	W	L	E	P	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	V	F	L	Q	I	K	N	T	S	D	.	K	D	M	S	G	L	Q	G	K	I	A	D	A	V	K	A	K	G	Y	Q	V	V	T
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	V	I	V	D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	K	P	G	V	I	V	Y	V	S	C	N	P	E	T	F	A	R	D	V	K	M	L	.	.	.	.	.	.	.	.	.	.	.	D	Y	R	I	D	E
Template Known Secondary structure		S								T	T		S														S							S												T	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.												380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions